Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G004060.1 | Barley | plastid | 85.95 | 62.53 |
| HORVU1Hr1G004040.1 | Barley | plastid | 85.95 | 62.53 |
| TraesCS1D01G040300.1 | Wheat | cytosol | 83.67 | 41.94 |
| TraesCS7D01G452200.1 | Wheat | cytosol | 43.46 | 37.44 |
| TraesCS2D01G024500.2 | Wheat | cytosol | 33.01 | 35.85 |
| TraesCS5D01G494600.1 | Wheat | cytosol | 30.85 | 34.78 |
| TraesCS4D01G002400.1 | Wheat | endoplasmic reticulum, golgi | 22.93 | 33.28 |
| Os11t0592500-01 | Rice | cytosol | 13.33 | 32.36 |
| TraesCS7D01G513100.2 | Wheat | cytosol | 38.54 | 32.1 |
| TraesCS3D01G491500.2 | Wheat | cytosol | 36.25 | 29.78 |
| TraesCS7D01G027700.2 | Wheat | cytosol | 36.13 | 29.68 |
| TraesCS5D01G349800.2 | Wheat | nucleus | 46.1 | 28.49 |
| TraesCS4D01G089900.1 | Wheat | plastid | 42.14 | 26.49 |
| TraesCS7D01G020700.1 | Wheat | nucleus | 38.06 | 25.08 |
| TraesCS7D01G022400.1 | Wheat | nucleus | 37.82 | 23.95 |
| TraesCS2D01G004500.1 | Wheat | cytosol | 32.89 | 22.37 |
| TraesCS5D01G332000.1 | Wheat | cytosol | 39.14 | 22.3 |
| TraesCS7D01G005400.1 | Wheat | cytosol, nucleus, peroxisome | 36.01 | 21.91 |
| TraesCS2D01G511600.2 | Wheat | nucleus | 36.97 | 21.66 |
| TraesCS4D01G002300.1 | Wheat | cytosol | 8.04 | 21.0 |
| TraesCS1D01G381400.1 | Wheat | cytosol, nucleus, plastid | 36.13 | 19.17 |
| TraesCS7D01G004600.1 | Wheat | cytosol | 34.33 | 18.74 |
| TraesCS7D01G007900.1 | Wheat | cytosol | 34.45 | 18.73 |
| TraesCS7D01G007300.2 | Wheat | cytosol, plastid | 34.21 | 18.51 |
| TraesCS2D01G574600.1 | Wheat | cytosol | 43.34 | 18.36 |
| TraesCS7D01G024900.1 | Wheat | golgi | 45.86 | 18.16 |
| TraesCS5D01G522000.1 | Wheat | cytosol, plastid | 6.36 | 16.51 |
| TraesCS2D01G574800.1 | Wheat | cytosol | 5.04 | 15.79 |
| TraesCS7D01G005300.1 | Wheat | cytosol | 5.88 | 14.37 |
| TraesCS5D01G492000.1 | Wheat | cytosol | 4.8 | 13.47 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G028900.1 | EnsemblPlantsGene:TraesCS1D01G028900 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR43889 | PANTHER:PTHR43889:SF1 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52047 |
| SUPFAM:SSF52540 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:11409550..11412832
Molecular Weight (calculated)
93337.9 Da
IEP (calculated)
6.544
GRAVY (calculated)
-0.039
Length
833 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSPVKQLCG WLANDGQPEH KVASIVGTSG VGKTTLAREV YRKLGGQFEC RAFVQTSRKQ DMKTLLTSIL SQVRRHHLPD SFEVHKLLFE IKEHLQDKTY
101: IIVIDNLWAS STWDIIGHAL PKGNCCSRIL TTTEVDAIAQ TCCADTSKYI FKKEPLSEDE SRELFLVTVF GHEAGCPQVL KEVSNEIIKR SGGLPLAIII
201: LASLLAGQPA SSIEHWNYIK NSLSSDPSTN TSLEGIKQVL NLGYDNLPHS LKACMLYLCL YEEDCVIWKD DLLKQWMAEG FIYAMDGNGG KEVARSYFDE
301: LVNRGMIQPM DISCNDEILS FRVHAMVLHF IRYKSVEENF SIALDHSQTT IRLADRVRRL ALHFGNTEHA TPPIPASMRL SQVRSLAFSG LLKCMPSLVE
401: FRFLQVLILK LWAHPDNITE ADDLSDNLTE PGDLSYNLTE ISELFRLRYF HLDACHMSVD LPTQMKWLKD LVAWEIDADV TAVPSDIVDL PGLFFLSIPS
501: EAHLPTGIGR MTSLRTLGII DLSKNSTENI MSLGELTNLQ DLRLTCSTLQ PDNLEKNLEC LGLIIRKLSN LKCVTLVPVV SSHVKTQDDA SSSRMTISWL
601: GFAKVSPSPA VLQRLELSRR CFILSSLPEW TKDLTKLGIL KMAVRKVSSE DVVILKGLPS LTALSLFVWT APTRRIIFDN EGFLVLKYFK FVCLAPCLSF
701: LDGAMPKVEN LKLGFNANRM ERYSLVAAGF EHLVGLNKLS TKIGGAGTNE CNRRSAELVF ADAISKHPST PIINVQWVDW NYCGNYNKYT EVPKEIFKQL
801: GVQEKNLEGD ANKLPYISAW LSTLDLASTE YSQ
101: IIVIDNLWAS STWDIIGHAL PKGNCCSRIL TTTEVDAIAQ TCCADTSKYI FKKEPLSEDE SRELFLVTVF GHEAGCPQVL KEVSNEIIKR SGGLPLAIII
201: LASLLAGQPA SSIEHWNYIK NSLSSDPSTN TSLEGIKQVL NLGYDNLPHS LKACMLYLCL YEEDCVIWKD DLLKQWMAEG FIYAMDGNGG KEVARSYFDE
301: LVNRGMIQPM DISCNDEILS FRVHAMVLHF IRYKSVEENF SIALDHSQTT IRLADRVRRL ALHFGNTEHA TPPIPASMRL SQVRSLAFSG LLKCMPSLVE
401: FRFLQVLILK LWAHPDNITE ADDLSDNLTE PGDLSYNLTE ISELFRLRYF HLDACHMSVD LPTQMKWLKD LVAWEIDADV TAVPSDIVDL PGLFFLSIPS
501: EAHLPTGIGR MTSLRTLGII DLSKNSTENI MSLGELTNLQ DLRLTCSTLQ PDNLEKNLEC LGLIIRKLSN LKCVTLVPVV SSHVKTQDDA SSSRMTISWL
601: GFAKVSPSPA VLQRLELSRR CFILSSLPEW TKDLTKLGIL KMAVRKVSSE DVVILKGLPS LTALSLFVWT APTRRIIFDN EGFLVLKYFK FVCLAPCLSF
701: LDGAMPKVEN LKLGFNANRM ERYSLVAAGF EHLVGLNKLS TKIGGAGTNE CNRRSAELVF ADAISKHPST PIINVQWVDW NYCGNYNKYT EVPKEIFKQL
801: GVQEKNLEGD ANKLPYISAW LSTLDLASTE YSQ
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.