Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G203800.1 | Wheat | cytosol | 61.65 | 56.75 |
| TraesCS5D01G492000.1 | Wheat | cytosol | 41.35 | 37.04 |
| TraesCS5D01G522000.1 | Wheat | cytosol, plastid | 29.7 | 24.61 |
| TraesCS4D01G002300.1 | Wheat | cytosol | 24.44 | 20.38 |
| TraesCS7D01G005300.1 | Wheat | cytosol | 25.56 | 19.94 |
| TraesCS5D01G494600.1 | Wheat | cytosol | 43.23 | 15.56 |
| TraesCS7D01G513100.2 | Wheat | cytosol | 55.64 | 14.8 |
| TraesCS2D01G024500.2 | Wheat | cytosol | 27.82 | 9.65 |
| TraesCS2B01G625800.1 | Wheat | cytosol | 63.91 | 9.08 |
| TraesCS2D01G574600.1 | Wheat | cytosol | 58.65 | 7.93 |
| TraesCS7D01G452200.1 | Wheat | cytosol | 28.57 | 7.86 |
| TraesCS3D01G491500.2 | Wheat | cytosol | 27.44 | 7.2 |
| TraesCS7D01G027700.2 | Wheat | cytosol | 27.44 | 7.2 |
| OQU83390 | Sorghum | nucleus | 26.69 | 7.09 |
| TraesCS4D01G089900.1 | Wheat | plastid | 28.2 | 5.66 |
| TraesCS7D01G020700.1 | Wheat | nucleus | 25.94 | 5.46 |
| TraesCS7D01G024900.1 | Wheat | golgi | 42.48 | 5.37 |
| TraesCS7D01G022400.1 | Wheat | nucleus | 26.32 | 5.32 |
| TraesCS1D01G028900.1 | Wheat | cytosol | 15.79 | 5.04 |
| TraesCS2D01G511600.2 | Wheat | nucleus | 26.32 | 4.92 |
| TraesCS7D01G007300.2 | Wheat | cytosol, plastid | 27.82 | 4.81 |
| TraesCS7D01G004600.1 | Wheat | cytosol | 27.07 | 4.72 |
| TraesCS7D01G005400.1 | Wheat | cytosol, nucleus, peroxisome | 24.06 | 4.67 |
| TraesCS5D01G349800.2 | Wheat | nucleus | 22.93 | 4.53 |
| TraesCS5D01G332000.1 | Wheat | cytosol | 24.81 | 4.51 |
| TraesCS7D01G007900.1 | Wheat | cytosol | 25.56 | 4.44 |
| TraesCS1D01G040300.1 | Wheat | cytosol | 25.94 | 4.15 |
| TraesCS1D01G381400.1 | Wheat | cytosol, nucleus, plastid | 23.68 | 4.01 |
| TraesCS2D01G004500.1 | Wheat | cytosol | 15.79 | 3.43 |
| Zm00001d048637_P001 | Maize | cytosol | 4.89 | 1.57 |
| TraesCS4D01G002400.1 | Wheat | endoplasmic reticulum, golgi | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G574800.1 | EnsemblPlantsGene:TraesCS2D01G574800 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF3 | PFAM:PF00931 |
| SEG:seg | SUPFAM:SSF52540 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:639289967..639296100
Molecular Weight (calculated)
29478.9 Da
IEP (calculated)
6.839
GRAVY (calculated)
-0.146
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLDAASSL PAMADPDPVL LQVAMQDPIT AWLGPVGPLL RKLHLAHSLP PDLLRDDDDI RRLKDLCMCL KIMSEDQDAN CMVQWWMKMA RELCYDTDDL
101: LDEFSGIGLH LHFPARAKDE LSGLLARVKD ACERRQRFQL SSPKAGGAEA GASGLTVPIS GCSTVSHVEL PEQLVELLAL DDDQKTLKVI PITGCAGVGK
201: TTVARALYHR HGWKFQCRAF VTVSRNPHMR GFLTSMLSQL KAPWLNGFPD VPDLIHAISK HLRGKR
101: LDEFSGIGLH LHFPARAKDE LSGLLARVKD ACERRQRFQL SSPKAGGAEA GASGLTVPIS GCSTVSHVEL PEQLVELLAL DDDQKTLKVI PITGCAGVGK
201: TTVARALYHR HGWKFQCRAF VTVSRNPHMR GFLTSMLSQL KAPWLNGFPD VPDLIHAISK HLRGKR
001: MASPSSFSSQ NYKFNVFASF HGPDVRKTLL SHIRLQFNRN GITMFDDQKI VRSATIGPSL VEAIKESRIS IVILSKKYAS SSWCLDELVE ILECKKAMGQ
101: IVMTIFYGVD PSDVRKQIGK FGIAFNETCA RKTEEERQKW SKALNQVSNI AGEDFLRWDN EAIMIEKIAR DVLDKLNATP SRDFDGMVGI EAHLREIKSL
201: LDLDNVEVKI VAIAGPAGIG KTTIARALYG LLSKRFQLSC FVDNLRGSYH SGFDEYGFKL HLQEQFLSKV LNQSGMRICH LGAIKENLSD QRVLIILDDV
301: NKLKQLEALA NETTWFGPGS RIVVTTENKE LLQQHGINNT YHVGFPSDED ALKILCSYAF KQTSPRHGFE ELSESVTKLC GKLPLGLCVV GSSLRGKKED
401: EWEDVVTRLE TILDQDIEDV LRVGYESLDE NAQTLFLHIA IFFNKEDGDL VKTMFAESDL DVKYGLKILE NRSLIKMKIF SNGDTKIVMH RLLQQMGKRA
501: IQKQEPWERQ ILIDAREICH VLEHAKGTGW NVHGMSFDIS RISEVSIRKK AFKRMPNLQF LKVYKSKDDG NNRMHVPEEM DFPCLLRLLD WKAYPSKSLP
601: PTFNPEHLVE LNMHSSQLEY LWQGTQPLKN LKKMDLSQSK NLKQLPDLSN ATNLEYLYLM GCESLIEIPS SISHLHKLEM LATVGCINLE VIPAHMNLES
701: LQTVYLGGCS RLRNIPVMST NIRYLFITNT AVEGVPLCPG LKTLDKTRIF ARAPSFATNP SGRRL
101: IVMTIFYGVD PSDVRKQIGK FGIAFNETCA RKTEEERQKW SKALNQVSNI AGEDFLRWDN EAIMIEKIAR DVLDKLNATP SRDFDGMVGI EAHLREIKSL
201: LDLDNVEVKI VAIAGPAGIG KTTIARALYG LLSKRFQLSC FVDNLRGSYH SGFDEYGFKL HLQEQFLSKV LNQSGMRICH LGAIKENLSD QRVLIILDDV
301: NKLKQLEALA NETTWFGPGS RIVVTTENKE LLQQHGINNT YHVGFPSDED ALKILCSYAF KQTSPRHGFE ELSESVTKLC GKLPLGLCVV GSSLRGKKED
401: EWEDVVTRLE TILDQDIEDV LRVGYESLDE NAQTLFLHIA IFFNKEDGDL VKTMFAESDL DVKYGLKILE NRSLIKMKIF SNGDTKIVMH RLLQQMGKRA
501: IQKQEPWERQ ILIDAREICH VLEHAKGTGW NVHGMSFDIS RISEVSIRKK AFKRMPNLQF LKVYKSKDDG NNRMHVPEEM DFPCLLRLLD WKAYPSKSLP
601: PTFNPEHLVE LNMHSSQLEY LWQGTQPLKN LKKMDLSQSK NLKQLPDLSN ATNLEYLYLM GCESLIEIPS SISHLHKLEM LATVGCINLE VIPAHMNLES
701: LQTVYLGGCS RLRNIPVMST NIRYLFITNT AVEGVPLCPG LKTLDKTRIF ARAPSFATNP SGRRL
Arabidopsis Description
RLM1BDisease resistance protein RML1B [Source:UniProtKB/Swiss-Prot;Acc:Q9CAK1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.