Factsheet for TraesCS2D01G511600.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G020700.1	Wheat	nucleus	58.23	65.51
HORVU5Hr1G122180.1	Barley	cytosol	53.73	59.78
TraesCS7D01G022400.1	Wheat	nucleus	55.06	59.54
TraesCS3D01G491500.2	Wheat	cytosol	39.45	55.33
TraesCS7D01G027700.2	Wheat	cytosol	39.31	55.13
TraesCS7D01G005300.1	Wheat	cytosol	11.6	48.39
TraesCS7D01G005400.1	Wheat	cytosol, nucleus, peroxisome	40.58	42.15
Os10t0370100-01	Rice	cytosol, plasma membrane, plastid	36.99	40.56
TraesCS2D01G024500.2	Wheat	cytosol	21.8	40.42
TraesCS5D01G332000.1	Wheat	cytosol	40.15	39.06
TraesCS7D01G007900.1	Wheat	cytosol	41.91	38.9
TraesCS7D01G452200.1	Wheat	cytosol	26.3	38.68
TraesCS7D01G004600.1	Wheat	cytosol	41.14	38.34
TraesCS7D01G007300.2	Wheat	cytosol, plastid	41.07	37.92
TraesCS1D01G028900.1	Wheat	cytosol	21.66	36.97
TraesCS5D01G494600.1	Wheat	cytosol	19.06	36.67
TraesCS1D01G381400.1	Wheat	cytosol, nucleus, plastid	40.44	36.62
TraesCS5D01G522000.1	Wheat	cytosol, plastid	8.09	35.83
TraesCS7D01G513100.2	Wheat	cytosol	23.35	33.2
Os11t0462900-00	Rice	plasma membrane	35.58	31.9
TraesCS4D01G002300.1	Wheat	cytosol	6.96	31.03
TraesCS4D01G089900.1	Wheat	plastid	27.43	29.43
TraesCS5D01G349800.2	Wheat	nucleus	26.09	27.52
TraesCS4D01G002400.1	Wheat	endoplasmic reticulum, golgi	10.69	26.48
TraesCS2D01G574800.1	Wheat	cytosol	4.92	26.32
TraesCS5D01G492000.1	Wheat	cytosol	4.92	23.57
TraesCS2D01G004500.1	Wheat	cytosol	19.62	22.78
TraesCS1D01G040300.1	Wheat	cytosol	25.25	21.6
TraesCS2D01G574600.1	Wheat	cytosol	24.82	17.96
TraesCS7D01G024900.1	Wheat	golgi	25.95	17.55

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043531	InterPro:IPR001471	InterPro:IPR032675	InterPro:IPR036955	InterPro:LRR_dom_sf
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00847	PFAM:PF00931	PRINTS:PR00364	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR43889	PANTHER:PTHR43889:SF7	SMART:SM00380	SUPFAM:SSF52047	SUPFAM:SSF52540
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS2D01G511600	EnsemblPlants:TraesCS2D01G511600.2	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr2D:-:603137584..603142107

Molecular Weight (calculated)

157967.0 Da

IEP (calculated)

9.116

GRAVY (calculated)

-0.283

Length

1422 amino acids

Sequence
(BLAST)

0001: MQGEYRSSSS SEGSAGSAAA AAAAAAAMAP LAAAAAAAAA KEEHNVKAAV APPIPMAMAM PLEPRKQYRG VRMRKWGKWV AEIREPHKRT RIWLGSYATP
0101: VAAARAYDTA VFYLRGRSAR LNFPDEISAL AQSSPEAEAG ALSAASIRKK AIEVGSRVDA LQTGMTTMVA APTHHHERKK HQSGSSGAGE LEGELGDGPV
0201: LPAASIRKKA IEVVSRVDAL QSGMMMGALP THHGERKKHH AGASGSGELE GELADGPVVP AALIRKKAIE VGSRMDALQR GMTMGAAPTH HRKQQKHQAS
0301: ASGEGKFAGE PADGAVLSVA SIREDIEVGP RADALQSGMK MVAAPTHHRG QQNHPHHHHS EPHGKELHRH QSLQHDHCWV ISASFGAMRA LIGKLDILLL
0401: APSSPHGCSS KRVKDGMRLL KDDVDEISSY LDELSEVEDP PPMAKCWMNE ARDLSYDIED YIDCLNNKKQ NKKQKKKKQK FSTSYVRIPK RLKWCKRITY
0501: VSRVSDHDNI RSVCRNIHVM ITARRLPKRP KNIAVLKMIS QFRTYIQDAI ERHDRYMLHC CSNLRRRTFV STGRMLPVPY EETDNHIVID GRMNEFINSL
0601: SANNAADQQQ LKVVSIHGSG CLGKTTLAKV LYNRIGMQFD CIAFIRVSKK PDMKRLLRDL FSQLHHKKQP LAASRNELGI SDNISRHLQD KRYLIVIDDL
0701: WDASVWDVIK YAFPKGNHSS RIIITTQIAD VALTCCCDHS EHVFEMKPLD DDHSRKLFFN RLFGSESDCP EEFQQVSNEI VDTCGGLPLA TINIASHLAN
0801: QTAVSLDLLT YIRDSLRSKL WSSPTSEITR QVLNLSYNNL PHYLRTCLLY LHMHPGGSII PKDDLVKQWV AEGFIASDKG KDQDQEMIEK IAGIYFDALI
0901: DGRFIQPLYN NKVLSCTVHD VVRDLIAQKS AEENFIVVVD CNRKNIAISH KVHRLSLIFG DAKYAKTPPN ITKSQVRSLT FFGLFECMPC IREFKVLRVL
1001: NLQLSGHRGN LEPIDLTGIS VLLQLRYLKI ASDVCIKLPN SMWGLKCLQT LDVMDATRVT AVPWDIIYLP HLLHLTLTVG TSLMEWIGSM YDSVISLWTL
1101: GKLNYLQDLH LTSSSTPPSS DHLKRSMEGL GSLIGGHGNL KTIVVAHGSS VKNFVVPGAS KVIIPWDHMA PPPLLQRFEF SPHNCCIFSR IPPWVEKHGN
1201: LSILKIPVRE LTMICVDTLG GLCALTALSL YVETAPTHKI IFEKAARFSV LKYFKLRFTT GIACLKFEAN AMPNLLKLKL VFNAIPPMGH PLFSRSGQVQ
1301: HQHGTAVINI EHMPGLKEIS TKFGGAASDL EYASRTVVSN HPSNPTINMQ LVGYSSDVDI STKQKQQPDD ILEEQPDEND TTLEEPADKR ISTSPESSSR
1401: LPSSKKRKRS PFLDFHQDCT PW

Best Arabidopsis Sequence Match ( AT2G23340.1 )
(BLAST)

001: METEAAVTAT VTAATMGIGT RKRDLKPYKG IRMRKWGKWV AEIREPNKRS RIWLGSYATP EAAARAYDTA VFYLRGPSAR LNFPELLAGL TVSNGGGRGG
101: DLSAAYIRRK AAEVGAQVDA LGATVVVNTG GENRGDYEKI ENCRKSGNGS LERVDLNKLP DPENSDGDDD ECVKRR

Arabidopsis Description

ERF008Ethylene-responsive transcription factor ERF008 [Source:UniProtKB/Swiss-Prot;Acc:O22174]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.