Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G332000.1 | Wheat | cytosol | 96.08 | 95.55 |
| TraesCS5B01G326100.1 | Wheat | cytosol | 82.19 | 82.13 |
| Os10t0370100-01 | Rice | cytosol, plasma membrane, plastid | 37.35 | 41.87 |
| TraesCS7B01G405700.1 | Wheat | cytosol, nucleus, plasma membrane | 38.17 | 41.02 |
| TraesCS7B01G365100.1 | Wheat | cytosol | 26.27 | 39.63 |
| TraesCS6B01G099900.3 | Wheat | cytosol | 38.03 | 37.93 |
| TraesCS6B01G013200.1 | Wheat | cytosol | 12.52 | 37.14 |
| TraesCS2B01G033600.1 | Wheat | cytosol | 23.52 | 37.01 |
| TraesCS1B01G003600.1 | Wheat | plasma membrane, vacuole | 23.45 | 35.05 |
| Os11t0462900-00 | Rice | plasma membrane | 37.83 | 34.68 |
| TraesCS5B01G020400.1 | Wheat | cytosol | 8.87 | 34.04 |
| TraesCS7B01G441700.1 | Wheat | cytosol, nucleus, peroxisome | 23.11 | 31.49 |
| TraesCS4B01G093200.2 | Wheat | plastid | 27.99 | 30.69 |
| TraesCS6B01G041800.1 | Wheat | cytosol | 26.07 | 30.1 |
| TraesCS5B01G521200.1 | Wheat | cytosol | 27.24 | 29.18 |
| TraesCS5B01G344200.1 | Wheat | nucleus | 28.27 | 29.17 |
| TraesCS5B01G491600.1 | Wheat | cytosol | 24.83 | 27.77 |
| TraesCS5B01G494300.1 | Wheat | cytosol | 26.55 | 26.64 |
| TraesCS2B01G030200.1 | Wheat | cytosol | 24.48 | 26.23 |
| TraesCS5B01G344100.2 | Wheat | cytosol | 17.19 | 24.63 |
| TraesCS3B01G604600.1 | Wheat | cytosol | 6.05 | 23.85 |
| TraesCS2B01G033500.1 | Wheat | cytosol | 23.18 | 21.55 |
| TraesCS1B01G010000.1 | Wheat | cytosol | 24.42 | 19.45 |
| TraesCS2B01G625800.1 | Wheat | cytosol | 25.03 | 19.44 |
| TraesCS3B01G604900.1 | Wheat | cytosol | 23.25 | 17.7 |
Protein Annotations
| MapMan:15.5.12 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR005202 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF03514 | PRINTS:PR00364 | PFscan:PS50985 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF7 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | InterPro:TF_GRAS | EnsemblPlantsGene:TraesCS5B01G326400 | EnsemblPlants:TraesCS5B01G326400.2 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:510700702..510705694
Molecular Weight (calculated)
163806.0 Da
IEP (calculated)
7.029
GRAVY (calculated)
-0.099
Length
1454 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVGWAFKKK GEEWRSALQE SGAEHSYSLA VEYSGQVTSL VDLADLEEGL TNRSIYDSRF SSTSFPTEEE VLGQHGSVFF DSTKGLWECR HCDWTHRLIS
0101: PCRNVDFPYY QRCGQVTMEA PFGMGSLLGK LGMLLAPQGC RLPSRVKDRM HLLKEDVEDL SEYLAEMAEA EDLPLTAKRW MKEARELAYD IEDNMDMCVQ
0201: PARASINTTR FICKIGRHVK IPKRLFSKRR LPKGLKWHKQ IAYIAQVPAE HSGKIRSACK AIRVVIIRLP KRLKWYKHIM ELISDFRMYI QEAIERHERY
0301: ELHRCSTFRR RFLPADRTLL TAYGGIADMV IDDRVSEFID SLDNDGDQQL KVVSVLGPGC LGKTALAQVL YNKFGGQFDC TAFVRVSKRP DVVRLLREML
0401: MQVQGQQPTE YSEELDLAYS IREHLQDKRY LIIIDDIWTA SAWDIISDAF PKGNHGSRVI TTTQMEEVAL TCCCYHSEHI FEMRPLDHDH SRKLFFSILF
0501: GSESDCPKEL KEVTNKIFEL CGGLPLATIS IASLLSSQPV IKMDLLTHLC DSLSSCLWIS PSEGTRQALN LSYNNLPHYL KICLLCLNMY PEGHTIWKDD
0601: LVKQWVAEGF IHTTEGQDME KVAASYFNEL INRRFIQTLC SKYNNEVLSC TVHDVVHDLI ADKCSEENFN MVIDSSRRNV ALPQKVRRLS LLFGDAKYVK
0701: TPANMRRSQV RSLTIFGLFE SMPSISEFKL LRVLNLQLSS YGDRNAINLT GISDLFQLRY LKIACDICIQ LPNHMLGLQC LETLVLDSEV IAVPWDIIHL
0801: PSLLHLSLLV MTNLLDWIGS MRLIGKLNNL RDLHLTYSVP SSDHLKRSME ALGSQLSGHA NLKTLALVNG PCHKNAFVCD ALKVTVSWEG LVPPPVLEVF
0901: EWSLHSCVLS RIPKWIGELG KLRILKIAVR DLPRDGIDAV RGLPALTALS LYLQTATVER IVFDKVGFSV LNYFNLRCSV PCLKFEANAM PNLRKLKLGF
1001: NAPRARMDQH GAGTAISIDH LPSLKEICAK IGGACADTES ALATAISNHP SNPMINVQLV DYTFEGDELT HEQDEVLVEG QDGYLKKLLI SCARAVEAKD
1101: MSAVDMMVPE LRKMVSVSGD PHQRLGAYIV EGLVARLASS GHSIYKALKC KEPRSSDLMS YMHFLYEACP YFKFGYMSAN GAIAEAVKGE DMIHIIDFGI
1201: SQGAQWISLL QALATRPGGP PTVRITGIDD SLSAYARGGG LDLVGRRLSH IAGLCKVPFE FHSVAVAGDE VEEGHLMVIP GEALAVNFTL ELHHIPDEAV
1301: STANHRDRIL RLVKSLSPKV VTLVEQELNT NTVPFKQRFA ETLHYYTAIF ESIDLTLPRD DERINMEQHC LAREIVNIVA CEGAERVERH EVFGKWKGRL
1401: TMVGFRPRPL SSLVNASIRT LLQSYSANYQ LAEKDGVLYL GWKNKPLVVS SAWH
0101: PCRNVDFPYY QRCGQVTMEA PFGMGSLLGK LGMLLAPQGC RLPSRVKDRM HLLKEDVEDL SEYLAEMAEA EDLPLTAKRW MKEARELAYD IEDNMDMCVQ
0201: PARASINTTR FICKIGRHVK IPKRLFSKRR LPKGLKWHKQ IAYIAQVPAE HSGKIRSACK AIRVVIIRLP KRLKWYKHIM ELISDFRMYI QEAIERHERY
0301: ELHRCSTFRR RFLPADRTLL TAYGGIADMV IDDRVSEFID SLDNDGDQQL KVVSVLGPGC LGKTALAQVL YNKFGGQFDC TAFVRVSKRP DVVRLLREML
0401: MQVQGQQPTE YSEELDLAYS IREHLQDKRY LIIIDDIWTA SAWDIISDAF PKGNHGSRVI TTTQMEEVAL TCCCYHSEHI FEMRPLDHDH SRKLFFSILF
0501: GSESDCPKEL KEVTNKIFEL CGGLPLATIS IASLLSSQPV IKMDLLTHLC DSLSSCLWIS PSEGTRQALN LSYNNLPHYL KICLLCLNMY PEGHTIWKDD
0601: LVKQWVAEGF IHTTEGQDME KVAASYFNEL INRRFIQTLC SKYNNEVLSC TVHDVVHDLI ADKCSEENFN MVIDSSRRNV ALPQKVRRLS LLFGDAKYVK
0701: TPANMRRSQV RSLTIFGLFE SMPSISEFKL LRVLNLQLSS YGDRNAINLT GISDLFQLRY LKIACDICIQ LPNHMLGLQC LETLVLDSEV IAVPWDIIHL
0801: PSLLHLSLLV MTNLLDWIGS MRLIGKLNNL RDLHLTYSVP SSDHLKRSME ALGSQLSGHA NLKTLALVNG PCHKNAFVCD ALKVTVSWEG LVPPPVLEVF
0901: EWSLHSCVLS RIPKWIGELG KLRILKIAVR DLPRDGIDAV RGLPALTALS LYLQTATVER IVFDKVGFSV LNYFNLRCSV PCLKFEANAM PNLRKLKLGF
1001: NAPRARMDQH GAGTAISIDH LPSLKEICAK IGGACADTES ALATAISNHP SNPMINVQLV DYTFEGDELT HEQDEVLVEG QDGYLKKLLI SCARAVEAKD
1101: MSAVDMMVPE LRKMVSVSGD PHQRLGAYIV EGLVARLASS GHSIYKALKC KEPRSSDLMS YMHFLYEACP YFKFGYMSAN GAIAEAVKGE DMIHIIDFGI
1201: SQGAQWISLL QALATRPGGP PTVRITGIDD SLSAYARGGG LDLVGRRLSH IAGLCKVPFE FHSVAVAGDE VEEGHLMVIP GEALAVNFTL ELHHIPDEAV
1301: STANHRDRIL RLVKSLSPKV VTLVEQELNT NTVPFKQRFA ETLHYYTAIF ESIDLTLPRD DERINMEQHC LAREIVNIVA CEGAERVERH EVFGKWKGRL
1401: TMVGFRPRPL SSLVNASIRT LLQSYSANYQ LAEKDGVLYL GWKNKPLVVS SAWH
001: MRLSVFIIPL VESRQASGII NKQSTSLLIR FSLYLEASIS TKSFFSKSQR ISQTQSPICL SANYYQPDNL DMEATQKHMI QEGSSMFYHQ PSSVKQMDLS
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
Arabidopsis Description
SCL5scarecrow-like 5 [Source:TAIR;Acc:AT1G50600]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.