Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043479_P001 | Maize | cytosol, plastid | 93.49 | 96.63 |
| TraesCS3A01G290100.1 | Wheat | cytosol | 88.37 | 91.79 |
| TraesCS3B01G324700.2 | Wheat | nucleus | 91.16 | 91.16 |
| TraesCS3D01G289900.2 | Wheat | nucleus | 91.16 | 91.16 |
| HORVU3Hr1G071800.7 | Barley | cytosol, nucleus, plastid | 91.16 | 90.74 |
| Os01t0750500-01 | Rice | cytosol | 90.7 | 90.7 |
| EES19245 | Sorghum | cytosol | 74.42 | 74.42 |
Protein Annotations
| EnsemblPlants:KXG33372 | EnsemblPlantsGene:SORBI_3003G296600 | InterPro:DUF814 | ncoils:Coil | PANTHER:PTHR13049 | PANTHER:PTHR13049:SF3 |
| PFAM:PF05670 | ProteinID:KXG33372 | ProteinID:KXG33372.1 | SEG:seg | UniParc:UPI0001C80B1C | UniProt:A0A1B6Q625 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:62865339..62868910
Molecular Weight (calculated)
24863.9 Da
IEP (calculated)
8.865
GRAVY (calculated)
-0.744
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLYFKARPD AGDYTIYMGA DKNENEELIK YGLPEDVWFH VDKVSSAHVY LRLKKGETID TISEGLLEDC AQLVKAHSIQ GNKMNNVEVI YTPWSNLKKS
101: PSMDVGQVGF HNPRMVHVLT VEKRVNEIIN RLNKTRVERR ADLKAEKEAS NAAEKAERKM QLKEKKRKEE IERLEKEKWA EIRSYKGLMV AEKMTSNRQI
201: ASAGKSMQEM EDEFV
101: PSMDVGQVGF HNPRMVHVLT VEKRVNEIIN RLNKTRVERR ADLKAEKEAS NAAEKAERKM QLKEKKRKEE IERLEKEKWA EIRSYKGLMV AEKMTSNRQI
201: ASAGKSMQEM EDEFV
001: MVFYFKARPD AGDYTIFMGL DKFENEELIK YGFPEDVWFH VDKMSSAHVY LRLHRGQSFD DISEGVLEDC AQLVKANSIQ GNKVNNVDVV YTPWSNLKKT
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
Arabidopsis Description
Coiled-coil protein [Source:UniProtKB/TrEMBL;Acc:Q9LYE1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.