CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053818_P003	Maize	mitochondrion	88.97	87.65
TraesCS6B01G167900.1	Wheat	plastid	80.45	80.05
TraesCS6A01G139400.2	Wheat	plastid	80.45	80.05
TraesCS6D01G129900.1	Wheat	plastid	79.95	79.55
Os02t0165100-01	Rice	plasma membrane	76.94	79.12
HORVU0Hr1G015530.1	Barley	plastid	79.2	78.8
EER90214	Sorghum	cytosol	67.42	70.6
GSMUA_Achr8P33290_001	Banana	cytosol	61.4	64.99
GSMUA_Achr2P01370_001	Banana	cytosol	60.9	63.45
GSMUA_Achr3P23320_001	Banana	cytosol, mitochondrion	61.65	62.28
EES12875	Sorghum	cytosol	57.89	61.76
GSMUA_Achr8P07140_001	Banana	mitochondrion	59.65	60.25
EES17368	Sorghum	cytosol	22.06	59.86
KRH13014	Soybean	cytosol	58.4	59.44
KRH43827	Soybean	cytosol	56.14	59.26
KRH44858	Soybean	cytosol, nucleus, plastid	57.14	58.46
VIT_19s0027g00390.t01	Wine grape	cytosol	56.39	58.44
GSMUA_Achr1P25690_001	Banana	cytosol, plasma membrane, plastid	58.9	58.31
KRH13643	Soybean	cytosol	55.89	58.22
PGSC0003DMT400029343	Potato	cytosol, mitochondrion	56.14	58.03
Solyc10g005630.2.1	Tomato	cytosol	55.89	57.92
VIT_19s0014g01530.t01	Wine grape	mitochondrion	55.64	57.66
EES14682	Sorghum	cytosol	51.88	56.71
CDY50993	Canola	cytosol	55.14	56.41
Bra026710.1-P	Field mustard	cytosol	55.14	56.41
CDY40041	Canola	cytosol	55.39	55.81
Solyc07g062620.2.1	Tomato	cytosol	53.63	55.58
PGSC0003DMT400032254	Potato	cytosol	53.63	55.58
EES17374	Sorghum	mitochondrion	52.38	55.44
CDX81773	Canola	cytosol	54.64	55.19
AT1G16670.1	Thale cress	cytosol	53.38	54.62
Bra026032.1-P	Field mustard	cytosol	54.14	54.55
CDY35110	Canola	cytosol	54.14	54.55
Bra026711.1-P	Field mustard	cytosol	53.13	53.67
CDX81772	Canola	cytosol	52.88	53.55
CDX83948	Canola	cytosol	52.88	53.02
KRH26219	Soybean	cytosol	54.39	52.93
CDY50994	Canola	cytosol	47.12	51.37
KRH55104	Soybean	plasma membrane	54.89	48.99
KXG27447	Sorghum	cytosol	45.36	48.66
KXG23971	Sorghum	mitochondrion	19.8	44.63
EER95133	Sorghum	plastid	42.61	44.16
KXG30706	Sorghum	mitochondrion, plastid	41.6	40.39
CDX96813	Canola	cytosol	53.38	38.8
EES11585	Sorghum	plasma membrane	39.35	38.2
Bra016636.1-P	Field mustard	cytosol	52.63	33.23

Protein Annotations

Gene3D:1.10.510.10	MapMan:26.4.3.3	Gene3D:3.30.200.20	UniProt:A0A194YMX6	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	ProteinID:KXG29541.1	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU84428	ProteinID:OQU84428
ProteinID:OQU84428.1	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF96	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3004G052000
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0007F1B668	:	:

Description

hypothetical protein

Coordinates

chr4:+:4207578..4213569

Molecular Weight (calculated)

44380.2 Da

IEP (calculated)

8.070

GRAVY (calculated)

-0.225

Length

399 amino acids

Sequence
(BLAST)

001: MSCCSIFCKK RRATRQPSSH HNEDVPGGTN ITKYTYKELA RATDNFNQSN KIGEGGFGSV YKGQLRNGTS IAVKVLSMES RQGVREFLNE LVAISGISHD
101: NLVRLYGYCV EGDQRILVYN HLENNSLAQT LLGSRHSNIQ FNWETRVNIC LGIARGLEYL HHGVSPYIVH RDIKASNILL DRDLTPKISD FGLAKLLPPN
201: ATHVSTRVAG TLGYLAPEYA IRGQVTRKSD VYSFGVLLLE IVSGRSNSDT RLAYEDQILL EKFPEITNGV LLLQTWMYYE QGILEKIIDR SLGSDLDVAQ
301: ACRFLKVGLL CTQDVMRHRP DMSKVIAMLT GESDIDSEKI SKPAIISDFM DLKVRSMRKA SDIATSSTFL SSLMAHSSPM LSNETTQASI TSTGISDRE

Best Arabidopsis Sequence Match ( AT1G16670.1 )
(BLAST)

001: MGCSWLSCHR REATEVDGEI AAIDNVKIYK YREIRQATDD FSAENKIGEG GFGSVYKGCL KDGKLAAIKV LSAESRQGVK EFLTEINVIS EIQHENLVKL
101: YGCCVEGNHR ILVYNFLENN SLDKTLLAGG YTRSGIQFDW SSRANICVGV AKGLAFLHEE VRPHIIHRDI KASNILLDKY LSPKISDFGL ARLMPPNMTH
201: VSTRVAGTIG YLAPEYAVRG QLTRKADIYS FGVLLMEIVS GRSNKNTRLP TEYQYLLERA WELYERNELV DLVDSGLNGV FDAEEACRYL KIGLLCTQDS
301: PKLRPSMSTV VRLLTGEKDI DYKKISRPGL ISDFMDLKVR GPVATKTEQV NRQNYTNPSS SSNGSSRDHS NAYSSGASSA NAGNTFSSTI

Arabidopsis Description

CRPK1Cold-responsive protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93YN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.