Factsheet for TraesCS6D01G129900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G167900.1	Wheat	plastid	99.5	99.5
TraesCS6A01G139400.2	Wheat	plastid	98.75	98.75
HORVU0Hr1G015530.1	Barley	plastid	97.76	97.76
Os02t0165100-01	Rice	plasma membrane	78.55	81.19
OQU84428	Sorghum	cytosol, mitochondrion, nucleus, plastid	79.55	79.95
Zm00001d053818_P003	Maize	mitochondrion	77.06	76.3
TraesCS7D01G451300.1	Wheat	cytosol	66.58	69.35
GSMUA_Achr8P33290_001	Banana	cytosol	61.35	65.25
GSMUA_Achr2P01370_001	Banana	cytosol	60.6	63.45
GSMUA_Achr3P23320_001	Banana	cytosol, mitochondrion	61.85	62.78
KRH43827	Soybean	cytosol	58.6	62.17
GSMUA_Achr8P07140_001	Banana	mitochondrion	60.85	61.77
TraesCS2D01G463100.1	Wheat	cytosol	56.11	60.32
KRH13643	Soybean	cytosol	57.61	60.31
GSMUA_Achr1P25690_001	Banana	cytosol, plasma membrane, plastid	59.85	59.55
KRH13014	Soybean	cytosol	58.1	59.44
TraesCS5D01G071900.1	Wheat	cytosol	53.87	59.34
KRH44858	Soybean	cytosol, nucleus, plastid	57.61	59.23
Solyc10g005630.2.1	Tomato	cytosol	56.86	59.22
PGSC0003DMT400029343	Potato	cytosol, mitochondrion	56.86	59.07
VIT_19s0014g01530.t01	Wine grape	mitochondrion	56.61	58.96
VIT_19s0027g00390.t01	Wine grape	cytosol	56.36	58.7
Solyc07g062620.2.1	Tomato	cytosol	55.86	58.18
PGSC0003DMT400032254	Potato	cytosol	55.61	57.92
CDY40041	Canola	cytosol	56.61	57.32
AT1G16670.1	Thale cress	cytosol	55.36	56.92
Bra026710.1-P	Field mustard	cytosol	55.11	56.67
CDY50993	Canola	cytosol	55.11	56.67
CDY35110	Canola	cytosol	55.86	56.57
Bra026032.1-P	Field mustard	cytosol	55.86	56.57
CDX81773	Canola	cytosol	54.61	55.44
KRH26219	Soybean	cytosol	56.11	54.88
Bra026711.1-P	Field mustard	cytosol	53.87	54.68
CDX81772	Canola	cytosol	53.37	54.31
TraesCS5D01G059300.1	Wheat	mitochondrion	52.87	54.22
CDX83948	Canola	cytosol	53.37	53.77
CDY50994	Canola	cytosol	47.38	51.91
KRH55104	Soybean	plasma membrane	56.36	50.56
TraesCS2D01G564300.1	Wheat	cytosol	46.38	48.19
TraesCS4D01G215200.1	Wheat	plastid	44.14	44.92
TraesCS6D01G218100.1	Wheat	plastid	23.94	44.04
TraesCS7D01G326100.1	Wheat	cytosol, plastid	40.15	43.63
CDX96813	Canola	cytosol	54.11	39.53
TraesCS2D01G500900.1	Wheat	plasma membrane	38.15	35.17
Bra016636.1-P	Field mustard	cytosol	53.37	33.86

Protein Annotations

Gene3D:1.10.510.10	MapMan:26.4.3.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF96	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6D01G129900	EnsemblPlants:TraesCS6D01G129900.1	TIGR:cd14066	:	:

Description

No Description!

Coordinates

chr6D:-:95723263..95725694

Molecular Weight (calculated)

44573.3 Da

IEP (calculated)

7.849

GRAVY (calculated)

-0.210

Length

401 amino acids

Sequence
(BLAST)

001: MGCSPFFCYK SGATRQQIST HTEDLPGDIN TIRYTYRELA RATENFNPSN KIGEGGFGSV YKGRLRNGKL IAVKVLSVES RQGLKEFLNE LMSISNISHG
101: NLVSLYGYCV EGNQRILVYN YLENNSLAQT LLGSGRSNIQ FNWRSRVNIC LGIARGLAYL HDDVNPHIVH RDIKASNILL DKDLTPKISD FGLAKLLPPN
201: ASHISTRVAG TLGYLAPEYA IRGQVTRKSD VYSFGVLLLE IVSGRSNTSS RLPYEDQILL EKFPEVTNGV LLLQTWMYYE QGDLAKIIDS SAGDDMDIEQ
301: ACRFLKVGLL CTQDVTRHRP TMSTVVSMLT GEKDVDSEKI SKPATISDFM DLKIRSMRRE NNIAFASSST LLSTIMAHSS PLLSQETTQA SITFTAISER
401: E

Best Arabidopsis Sequence Match ( AT1G16670.1 )
(BLAST)

001: MGCSWLSCHR REATEVDGEI AAIDNVKIYK YREIRQATDD FSAENKIGEG GFGSVYKGCL KDGKLAAIKV LSAESRQGVK EFLTEINVIS EIQHENLVKL
101: YGCCVEGNHR ILVYNFLENN SLDKTLLAGG YTRSGIQFDW SSRANICVGV AKGLAFLHEE VRPHIIHRDI KASNILLDKY LSPKISDFGL ARLMPPNMTH
201: VSTRVAGTIG YLAPEYAVRG QLTRKADIYS FGVLLMEIVS GRSNKNTRLP TEYQYLLERA WELYERNELV DLVDSGLNGV FDAEEACRYL KIGLLCTQDS
301: PKLRPSMSTV VRLLTGEKDI DYKKISRPGL ISDFMDLKVR GPVATKTEQV NRQNYTNPSS SSNGSSRDHS NAYSSGASSA NAGNTFSSTI

Arabidopsis Description

CRPK1Cold-responsive protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93YN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.