Factsheet for TraesCS4D01G215200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G214600.1	Wheat	plastid	97.97	97.97
TraesCS4A01G089700.1	Wheat	plastid	97.97	97.97
HORVU4Hr1G061130.3	Barley	plastid	97.46	97.46
EER95133	Sorghum	plastid	81.47	83.38
Os03t0264300-00	Rice	plasma membrane	80.71	81.12
Zm00001d028535_P001	Maize	plastid	80.2	80.41
Solyc09g014470.1.1	Tomato	plastid	32.99	62.2
PGSC0003DMT400049201	Potato	cytosol	57.87	60.64
Bra034047.1-P	Field mustard	cytosol	55.33	60.39
Solyc10g076760.1.1	Tomato	cytosol	57.36	60.11
CDY39111	Canola	cytosol	31.47	59.62
VIT_06s0004g06430.t01	Wine grape	cytosol	55.08	58.33
CDY07897	Canola	cytosol	57.11	57.69
Bra001333.1-P	Field mustard	cytosol	56.85	57.44
CDX73951	Canola	cytosol	56.85	57.44
VIT_08s0007g02150.t01	Wine grape	cytosol	55.33	57.37
AT3G09010.1	Thale cress	cytosol	56.6	56.74
KRH49354	Soybean	cytosol	54.06	56.05
KRH00205	Soybean	cytosol	54.06	56.05
TraesCS2D01G564300.1	Wheat	cytosol	54.06	55.18
PGSC0003DMT400021884	Potato	cytosol, mitochondrion, nucleus, plasma membrane	55.84	54.59
TraesCS7D01G326100.1	Wheat	cytosol, plastid	47.46	50.68
TraesCS6D01G218100.1	Wheat	plastid	27.92	50.46
Zm00001d047853_P002	Maize	mitochondrion	70.81	47.69
TraesCS7D01G451300.1	Wheat	cytosol	44.67	45.71
TraesCS5D01G071900.1	Wheat	cytosol	42.13	45.6
TraesCS2D01G463100.1	Wheat	cytosol	42.89	45.31
TraesCS5D01G059300.1	Wheat	mitochondrion	44.42	44.76
Solyc09g014460.1.1	Tomato	plasma membrane	21.32	44.21
TraesCS6D01G129900.1	Wheat	plastid	44.92	44.14
TraesCS2D01G500900.1	Wheat	plasma membrane	39.09	35.4

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF33	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4D01G215200
EnsemblPlants:TraesCS4D01G215200.1	TIGR:cd14066	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:-:368870432..368873878

Molecular Weight (calculated)

42807.3 Da

IEP (calculated)

8.149

GRAVY (calculated)

-0.231

Length

394 amino acids

Sequence
(BLAST)

001: MGSSASCLWS GSKSGPGPNG PAAAAASPRS GHVLSRSGRN IQVFSLKELK SATRNFQMTN CIGRGGFGPV YKGDLKDGTQ VAIKRLSAES KQGTNEFLTE
101: IDVISNVRHP NLVRLIGCCV EGNNRLLVYE YAENNSLSNA LLGPKSRCIP LNWQTRAAIC TGTASGLAFL HEEAQPRIVH RDIKASNILL DKTLVPKIGD
201: FGLAKLFPDA ITHISTRVAG TMGYLAPEYA LLGQLTKKAD IYSFGVLLLE VISGESSSKS TWGEDMHVLV EWTWKLREEG RLLEIVDPDV EEYPEEQVLR
301: FIKVALLCTQ ATAQQRPSMK QVVHMLANET EIDLQNAVPP GVLKEPRRKM GSLGDLALDT SSSQSTRVNA AGSCTTQTRD MNSCNFSTTE VSPR

Best Arabidopsis Sequence Match ( AT3G09010.1 )
(BLAST)

001: MRYNCFGLLD MCNGSDRLGQ REAEEICTNN VRVFSYNSLR SATDSFHPTN RIGGGGYGVV FKGVLRDGTQ VAVKSLSAES KQGTREFLTE INLISNIHHP
101: NLVKLIGCCI EGNNRILVYE YLENNSLASV LLGSRSRYVP LDWSKRAAIC VGTASGLAFL HEEVEPHVVH RDIKASNILL DSNFSPKIGD FGLAKLFPDN
201: VTHVSTRVAG TVGYLAPEYA LLGQLTKKAD VYSFGILVLE VISGNSSTRA AFGDEYMVLV EWVWKLREER RLLECVDPEL TKFPADEVTR FIKVALFCTQ
301: AAAQKRPNMK QVMEMLRRKE LNLNEDALTE PGVYRGVNRG RNHRGIGLRV GQGGSSQESS STQRDKGKSS AVPQGSTSNS NISFQSITEL APR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LF75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.