Factsheet for TraesCS6D01G218100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G235400.1	Wheat	cytosol	88.53	90.19
HORVU6Hr1G060250.5	Barley	mitochondrion	85.32	53.45
Zm00001d017374_P002	Maize	cytosol	58.72	38.44
Os02t0639100-00	Rice	cytosol	64.22	37.94
KXG30706	Sorghum	mitochondrion, plastid	67.43	35.77
KRH10841	Soybean	plastid	50.0	30.28
KRH20479	Soybean	cytosol	49.54	29.43
KRH50012	Soybean	cytosol	49.54	29.43
KRH21475	Soybean	cytosol, nucleus, plastid	50.0	28.91
PGSC0003DMT400057792	Potato	cytosol	48.17	28.69
TraesCS2D01G564300.1	Wheat	cytosol	50.0	28.24
GSMUA_Achr11P...	Banana	cytosol	49.08	28.16
Solyc02g078530.2.1	Tomato	cytosol	47.25	28.14
Solyc03g006500.2.1	Tomato	plastid	47.71	28.11
PGSC0003DMT400033378	Potato	plastid	47.71	28.11
TraesCS4D01G215200.1	Wheat	plastid	50.46	27.92
GSMUA_AchrUn_...	Banana	mitochondrion	48.17	27.49
TraesCS7D01G326100.1	Wheat	cytosol, plastid	45.87	27.1
VIT_00s0370g00010.t01	Wine grape	cytosol	50.46	24.94
TraesCS5D01G059300.1	Wheat	mitochondrion	44.5	24.81
TraesCS5D01G071900.1	Wheat	cytosol	41.28	24.73
TraesCS2D01G463100.1	Wheat	cytosol	42.2	24.66
TraesCS6D01G129900.1	Wheat	plastid	44.04	23.94
TraesCS7D01G451300.1	Wheat	cytosol	42.2	23.9
TraesCS2D01G500900.1	Wheat	plasma membrane	38.99	19.54

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF20	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
EnsemblPlantsGene:TraesCS6D01G218100	EnsemblPlants:TraesCS6D01G218100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:-:308329923..308331509

Molecular Weight (calculated)

24066.0 Da

IEP (calculated)

9.919

GRAVY (calculated)

-0.173

Length

218 amino acids

Sequence
(BLAST)

001: MGTASGLSYL HKKHEPNIVH RYIKASNVLL GRNYSPKIRD FGLAKLFPDN VTHVSTRVVG TTGYLAPEYV VHGQLTKKAD VYSFGVLLLE VISGRRVSET
101: IRSDTFLVRQ QAWLLYEQGT PLDIVDASVK DYPEAEVLRY VKVGLAYKQA APNGRPTMRQ VVKMLSRPAA SRELEIRLAD HHYSSALTCP GLSLSPLSSM
201: ATSSTNSASA TYSEIVPR

Best Arabidopsis Sequence Match ( AT1G16670.1 )
(BLAST)

001: MGCSWLSCHR REATEVDGEI AAIDNVKIYK YREIRQATDD FSAENKIGEG GFGSVYKGCL KDGKLAAIKV LSAESRQGVK EFLTEINVIS EIQHENLVKL
101: YGCCVEGNHR ILVYNFLENN SLDKTLLAGG YTRSGIQFDW SSRANICVGV AKGLAFLHEE VRPHIIHRDI KASNILLDKY LSPKISDFGL ARLMPPNMTH
201: VSTRVAGTIG YLAPEYAVRG QLTRKADIYS FGVLLMEIVS GRSNKNTRLP TEYQYLLERA WELYERNELV DLVDSGLNGV FDAEEACRYL KIGLLCTQDS
301: PKLRPSMSTV VRLLTGEKDI DYKKISRPGL ISDFMDLKVR GPVATKTEQV NRQNYTNPSS SSNGSSRDHS NAYSSGASSA NAGNTFSSTI

Arabidopsis Description

CRPK1Cold-responsive protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93YN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.