Factsheet for TraesCS6A01G235400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G218100.1	Wheat	plastid	90.19	88.53
HORVU6Hr1G060250.5	Barley	mitochondrion	89.25	54.89
Zm00001d017374_P002	Maize	cytosol	60.75	39.04
Os02t0639100-00	Rice	cytosol	65.89	38.21
KXG30706	Sorghum	mitochondrion, plastid	69.16	36.01
KRH10841	Soybean	plastid	52.8	31.39
KRH20479	Soybean	cytosol	52.34	30.52
KRH50012	Soybean	cytosol	52.34	30.52
KRH21475	Soybean	cytosol, nucleus, plastid	52.8	29.97
GSMUA_Achr11P...	Banana	cytosol	52.34	29.47
PGSC0003DMT400057792	Potato	cytosol	50.0	29.23
Solyc03g006500.2.1	Tomato	plastid	50.47	29.19
PGSC0003DMT400033378	Potato	plastid	50.47	29.19
GSMUA_AchrUn_...	Banana	mitochondrion	51.87	29.06
Solyc02g078530.2.1	Tomato	cytosol	49.07	28.69
TraesCS4A01G089700.1	Wheat	plastid	51.87	28.17
TraesCS2A01G589900.1	Wheat	cytosol	50.93	28.17
TraesCS7A01G329200.1	Wheat	cytosol	46.73	27.17
TraesCS5A01G048600.1	Wheat	mitochondrion	46.26	26.12
VIT_00s0370g00010.t01	Wine grape	cytosol	53.74	26.08
TraesCS5A01G060300.2	Wheat	cytosol	43.93	25.82
TraesCS2A01G462700.1	Wheat	cytosol	43.93	25.2
TraesCS7A01G463500.1	Wheat	cytosol	42.06	23.38
TraesCS6A01G139400.2	Wheat	plastid	43.46	23.19
TraesCS2A01G500700.1	Wheat	plasma membrane	40.19	20.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF20	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6A01G235400	EnsemblPlants:TraesCS6A01G235400.1	SEG:seg

Description

No Description!

Coordinates

chr6A:-:445253301..445254721

Molecular Weight (calculated)

23314.9 Da

IEP (calculated)

7.294

GRAVY (calculated)

-0.170

Length

214 amino acids

Sequence
(BLAST)

001: MGTAKGLSYL HEEHEPNIVH RDIKASNVLL GRNHSPKIGD FGLAKLFPDN VTHVTTRVVG TTGDLAPEYV VHGQLTKKAD VYSFGVLLLE VISGRRVSET
101: IRSDTFLAWL LYEQGRPLDI VDASVKDYPE AEVLRYVKVG LACTQAAPDG RPAMRQVVKM LSRPAAFREL EMHLADHDSS AALTRPGLSL SPLSSMATSS
201: TNSASATYSE TVPR

Best Arabidopsis Sequence Match ( AT1G07650.4 )
(BLAST)

001: MRISDNNFTG PIPDFISNWT RILKLQMHGC GLDGPIPSSI SSLTSLTDLR ISDLGGKPSS FPPLKNLESI KTLILRKCKI IGPIPKYIGD LKKLKTLDLS
101: FNLLSGEIPS SFENMKKADF IYLTGNKLTG GVPNYFVERN KNVDVSFNNF TDESSIPSHD CNRVTSNLVE SFALGNKSHK GSTCFLQRMP CVHPKRYHLY
201: KLYINCGGGE VKVDKEITYQ ADDEPKGASM YVLGANKRWA LSSTGNFMDN DDDADEYTVQ NTSRLSVNAS SPSFGLYRTA RVSPLSLTYY GICLGNGNYT
301: VNLHFAEIIF TDDNTLYSLG KRLFDIYVQD QLVIKNFNIQ EAARGSGKPI IKSFLVNVTD HTLKIGLRWA GKGTTGIPIR GVYGPMISAI SVEPNFKPPV
401: YYDTKDIILK VGVPVAAATL LLFIIVGVFW KKRRDKNDID KELRGLDLQT GTFTLRQIKA ATDNFDVTRK IGEGGFGSVY KGELSEGKLI AVKQLSAKSR
501: QGNREFVNEI GMISALQHPN LVKLYGCCVE GNQLILVYEY LENNCLSRAL FGKDESSRLK LDWSTRKKIF LGIAKGLTFL HEESRIKIVH RDIKASNVLL
601: DKDLNAKISD FGLAKLNDDG NTHISTRIAG TIGYMAPEYA MRGYLTEKAD VYSFGVVALE IVSGKSNTNF RPTEDFVYLL DWAYVLQERG SLLELVDPTL
701: ASDYSEEEAM LMLNVALMCT NASPTLRPTM SQVVSLIEGK TAMQELLSDP SFSTVNPKLK ALRNHFWQNE LSRSLSFSTS GPRTASANSL VDAEEKTGLL
801: D

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.