Factsheet for GSMUA_AchrUn_randomP05240_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	74.87	75.26
GSMUA_Achr3P14290_001	Banana	cytosol	66.75	67.46
GSMUA_Achr1P17640_001	Banana	cytosol	65.44	66.14
KRH10841	Soybean	plastid	58.38	61.94
KRH20479	Soybean	cytosol	59.42	61.85
KRH50012	Soybean	cytosol	58.64	61.04
Solyc02g078530.2.1	Tomato	cytosol	56.81	59.29
PGSC0003DMT400057792	Potato	cytosol	56.81	59.29
Solyc03g006500.2.1	Tomato	plastid	57.07	58.92
KRH21475	Soybean	cytosol, nucleus, plastid	57.85	58.62
PGSC0003DMT400033378	Potato	plastid	56.28	58.11
Zm00001d017374_P002	Maize	cytosol	47.64	54.65
TraesCS7B01G229900.1	Wheat	cytosol	52.09	54.08
TraesCS7D01G326100.1	Wheat	cytosol, plastid	51.57	53.39
TraesCS7A01G329200.1	Wheat	cytosol	51.31	53.26
HORVU6Hr1G060250.5	Barley	mitochondrion	48.17	52.87
TraesCS6A01G235400.1	Wheat	cytosol	29.06	51.87
Os02t0639100-00	Rice	cytosol	49.74	51.49
VIT_00s0370g00010.t01	Wine grape	cytosol	57.33	49.66
TraesCS6D01G218100.1	Wheat	plastid	27.49	48.17
KXG30706	Sorghum	mitochondrion, plastid	50.52	46.96
GSMUA_Achr8P33290_001	Banana	cytosol	45.81	46.42
GSMUA_Achr7P08000_001	Banana	cytosol	44.5	44.85
GSMUA_Achr6P30040_001	Banana	mitochondrion	44.76	44.53
GSMUA_Achr2P01370_001	Banana	cytosol	44.24	44.13
GSMUA_Achr3P23320_001	Banana	cytosol, mitochondrion	44.76	43.29
GSMUA_Achr1P25690_001	Banana	cytosol, plasma membrane, plastid	45.03	42.68
GSMUA_Achr8P07140_001	Banana	mitochondrion	43.98	42.53
GSMUA_Achr10P...	Banana	plasma membrane	35.34	38.03
GSMUA_AchrUn_...	Banana	cytosol	40.05	37.5

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_AchrUn_randomG05240_001	EnsemblPlants:GSMUA_AchrUn_randomP05240_001	EnsemblPlants:GSMUA_AchrUn_randomT05240_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0U6I6
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF20	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002966052	SEG:seg	:	:	:	:

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG05240_001]

Coordinates

chrchrUn_random:+:20640038..20657905

Molecular Weight (calculated)

42197.5 Da

IEP (calculated)

8.347

GRAVY (calculated)

-0.237

Length

382 amino acids

Sequence
(BLAST)

001: MVCSCFNALL SRRKHRQHSE QETGGFSSDK NVRLISYDEL RSATDNFHQS NKIGRGGFGT VYKGTLRNRV EIAVKVLSAE SKQGVNEFLT EIDAIANVRH
101: PNLVELIGCC AQGSSRILVY EYMENSSLDR ALLGLNIDDT SKLNWKIRSA VCIGTAKGLA YLHEELEPPI VHRDIKASNI LLDSDFAPKI GDFGLAKLFP
201: DNVTHISTRV AGTTGYLAPE YAMQGQLTKK ADVYSFGVLV IEIISSRSSS KTYWSGLGQS LLEWTWQLFG EGRIKEVIDP ALQEYPEEQV LRFIKVGLFC
301: TQASAGRRPS MPQVVEMLSK PMKLNEKELT PPGVVGGSLF MNNYRVPKAT NSSNTQFNES TTSATAVASA SNPSFLTQMI PR

Best Arabidopsis Sequence Match ( AT3G09010.1 )
(BLAST)

001: MRYNCFGLLD MCNGSDRLGQ REAEEICTNN VRVFSYNSLR SATDSFHPTN RIGGGGYGVV FKGVLRDGTQ VAVKSLSAES KQGTREFLTE INLISNIHHP
101: NLVKLIGCCI EGNNRILVYE YLENNSLASV LLGSRSRYVP LDWSKRAAIC VGTASGLAFL HEEVEPHVVH RDIKASNILL DSNFSPKIGD FGLAKLFPDN
201: VTHVSTRVAG TVGYLAPEYA LLGQLTKKAD VYSFGILVLE VISGNSSTRA AFGDEYMVLV EWVWKLREER RLLECVDPEL TKFPADEVTR FIKVALFCTQ
301: AAAQKRPNMK QVMEMLRRKE LNLNEDALTE PGVYRGVNRG RNHRGIGLRV GQGGSSQESS STQRDKGKSS AVPQGSTSNS NISFQSITEL APR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LF75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.