Factsheet for PGSC0003DMT400033378

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
plasma membrane 1
cytosol 1
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g006500.2.1	Tomato	plastid	97.3	97.3
PGSC0003DMT400057792	Potato	cytosol	73.78	74.59
KRH20479	Soybean	cytosol	65.95	66.48
KRH50012	Soybean	cytosol	65.95	66.48
KRH10841	Soybean	plastid	60.54	62.22
HORVU2Hr1G118980.1	Barley	mitochondrion	50.0	60.86
KRH21475	Soybean	cytosol, nucleus, plastid	59.19	58.09
GSMUA_AchrUn_...	Banana	mitochondrion	58.11	56.28
GSMUA_Achr3P14290_001	Banana	cytosol	57.03	55.82
GSMUA_Achr1P17640_001	Banana	cytosol	56.76	55.56
GSMUA_Achr11P...	Banana	cytosol	57.03	55.53
KXG27447	Sorghum	cytosol	55.68	55.38
PGSC0003DMT400049201	Potato	cytosol	55.68	54.79
Os04t0679200-01	Rice	cytosol	58.38	54.68
VIT_00s0370g00010.t01	Wine grape	cytosol	65.14	54.65
Zm00001d017374_P002	Maize	cytosol	48.65	54.05
HORVU2Hr1G118950.1	Barley	mitochondrion, plastid	55.68	53.37
TraesCS2D01G564300.1	Wheat	cytosol	55.68	53.37
HORVU3Hr1G022880.1	Barley	cytosol, mitochondrion, nucleus, plastid	26.49	52.97
Zm00001d001813_P001	Maize	cytosol	55.68	52.96
TraesCS2A01G589900.1	Wheat	cytosol	55.14	52.71
HORVU4Hr1G061290.1	Barley	mitochondrion	21.08	52.7
HORVU6Hr1G060250.5	Barley	mitochondrion	49.46	52.59
TraesCS2B01G594100.1	Wheat	cytosol	55.14	52.58
TraesCS7B01G229900.1	Wheat	cytosol	51.89	52.17
TraesCS7A01G329200.1	Wheat	cytosol	51.62	51.9
HORVU2Hr1G088080.1	Barley	mitochondrion, plastid	25.95	51.89
TraesCS7D01G326100.1	Wheat	cytosol, plastid	51.62	51.76
TraesCS6A01G235400.1	Wheat	cytosol	29.19	50.47
PGSC0003DMT400021884	Potato	cytosol, mitochondrion, nucleus, plasma membrane	54.05	49.63
HORVU6Hr1G058160.3	Barley	plasma membrane	24.86	48.68
Os02t0639100-00	Rice	cytosol	48.38	48.51
TraesCS6D01G218100.1	Wheat	plastid	28.11	47.71
KXG30706	Sorghum	mitochondrion, plastid	51.62	46.47
PGSC0003DMT400032254	Potato	cytosol	47.84	45.97
PGSC0003DMT400027119	Potato	cytosol	42.97	45.82
PGSC0003DMT400088826	Potato	cytosol	38.38	45.22
PGSC0003DMT400029343	Potato	cytosol, mitochondrion	44.59	42.75
PGSC0003DMT400053890	Potato	cytosol	42.97	41.62

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102603466	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1AZ19	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400012821
PGSC:PGSC0003DMG400012821	EnsemblPlants:PGSC0003DMT400033378	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF20	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294E16D	RefSeq:XP_006343244.1	RefSeq:XP_015162407.1	SEG:seg	:

Description

Serine/threonine-protein kinase PBS1 [Source:PGSC_GENE;Acc:PGSC0003DMG400012821]

Coordinates

chr3:+:1983019..1991635

Molecular Weight (calculated)

41141.1 Da

IEP (calculated)

7.528

GRAVY (calculated)

-0.339

Length

370 amino acids

Sequence
(BLAST)

001: MNCSCFGAST QRQKRGVDLV HQDTAGCSTA KTKNISYSEL RRATNNFHQS NKIGRGGFGI VYKGTLRNGM EVAVKTLSAE SRQGLREFLT EIETISDIRH
101: PNLVELIGYC LDGTNRILVY EYLENKSLDR ALFGSSTSNV KLDWDTRAAI CLGTGTGLAF LHEELVPHIV HRDIKASNIL LDKDYKPKIG DFGLAKLFPD
201: NITHITTQIK GTTGYLAPEY VMGRQLTSKA DVYSFGVLLL ETVSGRSSGS GTWQGQKSLL ESAWEFYEEG KLLELVDPEM GDFPEKEVLK YIKVALFCTQ
301: EKANRRPIMS QVLDMLTRNI KLNEEELTPP GFFQDSGGFS STQLKLKSSE SSTSHQMSSV PLTITQVTPR

Best Arabidopsis Sequence Match ( AT3G09010.1 )
(BLAST)

001: MRYNCFGLLD MCNGSDRLGQ REAEEICTNN VRVFSYNSLR SATDSFHPTN RIGGGGYGVV FKGVLRDGTQ VAVKSLSAES KQGTREFLTE INLISNIHHP
101: NLVKLIGCCI EGNNRILVYE YLENNSLASV LLGSRSRYVP LDWSKRAAIC VGTASGLAFL HEEVEPHVVH RDIKASNILL DSNFSPKIGD FGLAKLFPDN
201: VTHVSTRVAG TVGYLAPEYA LLGQLTKKAD VYSFGILVLE VISGNSSTRA AFGDEYMVLV EWVWKLREER RLLECVDPEL TKFPADEVTR FIKVALFCTQ
301: AAAQKRPNMK QVMEMLRRKE LNLNEDALTE PGVYRGVNRG RNHRGIGLRV GQGGSSQESS STQRDKGKSS AVPQGSTSNS NISFQSITEL APR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LF75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.