Factsheet for PGSC0003DMT400088826

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	cytosol
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g006940.1.1	Tomato	plasma membrane	96.5	80.8
GSMUA_Achr10P...	Banana	plasma membrane	66.24	58.59
KRH02726	Soybean	golgi, mitochondrion, plasma membrane	74.84	54.4
KRH12373	Soybean	plasma membrane	74.84	54.15
KRH37374	Soybean	plasma membrane, plastid, vacuole	74.52	54.04
Os04t0658700-00	Rice	plasma membrane	69.43	52.53
VIT_11s0052g00700.t01	Wine grape	plasma membrane	75.8	52.42
EES11585	Sorghum	plasma membrane	67.52	51.58
Zm00001d001993_P001	Maize	plasma membrane	67.2	49.76
TraesCS2A01G500700.1	Wheat	plasma membrane	67.2	49.76
TraesCS2B01G528600.1	Wheat	plasma membrane	66.88	49.53
HORVU2Hr1G111460.2	Barley	plasma membrane	66.88	49.3
TraesCS2D01G500900.1	Wheat	plasma membrane	66.88	48.28
PGSC0003DMT400057792	Potato	cytosol	45.86	39.34
PGSC0003DMT400033378	Potato	plastid	45.22	38.38
PGSC0003DMT400027119	Potato	cytosol	42.36	38.33
PGSC0003DMT400049201	Potato	cytosol	45.54	38.03
PGSC0003DMT400032254	Potato	cytosol	45.86	37.4
PGSC0003DMT400029343	Potato	cytosol, mitochondrion	45.86	37.31
PGSC0003DMT400021884	Potato	cytosol, mitochondrion, nucleus, plasma membrane	45.22	35.24
PGSC0003DMT400053890	Potato	cytosol	42.36	34.82

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1DGT4	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400038397	PGSC:PGSC0003DMG400038397	EnsemblPlants:PGSC0003DMT400088826
PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF21	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295D4E9	SEG:seg	:

Description

Serine-threonine protein kinase, plant-type [Source:PGSC_GENE;Acc:PGSC0003DMG400038397]

Coordinates

chr7:+:2669366..2670737

Molecular Weight (calculated)

35533.1 Da

IEP (calculated)

6.949

GRAVY (calculated)

-0.175

Length

314 amino acids

Sequence
(BLAST)

001: FNFHTLEKAT KNFHSDNLLG CGGFGPVFLG KLGDGQLIAV KKLSVDKSQQ GDREFLAEVR MITSIQHKNL VRLLGCCSEG DQRLLVYEYM KNRSLDQILY
101: GKSNIFLDWK TRYQIILGIA RGLQYLHEDS HIRIVHRDIK ASNILLDDKF QPKIGDFGLA RFFPEDQAYL STAFAGTLGY TAPEYAIRGE LSEKADIYSY
201: GVVVLEIINS RKNTDLSLPS EMQYLPEYAW KLYERSRLID LVDPKMLEDG MAEKDVMQTI HVAFLCLQPQ ANLRPPMSEI VAMLVTKAGT LTTPTPPPFL
301: DPELRIGRTI TVHG

Best Arabidopsis Sequence Match ( AT1G56120.3 )
(BLAST)

001: MQWMTFGINA LSGPIPKEIG LLTDLRLLGI SSNNFSGSLP AEIGSCTKLQ QMYIDSSGLS GGIPLSFANF VELEVAWIMD VELTGRIPDF IGFWTKLTTL
101: RILGTGLSGP IPSSFSNLIA LTELRLGDIS NGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGGYTSLQ QVDLSFNKLH GPIPASLFNL SRLTHLFLGN
201: NTLNGSLPTL KGQSLSNLDV SYNDLSGSLP SWVSLPDLKL NLVANNFTLE GLDNRVLSGL HCLQKNFPCN RGEGIYYNFS INCGGPEIRS VSGALFEKED
301: ADLGPASFVV SAAKRWAASS VGNFAGSSNN IYIATSLAQF INTMDSELFQ SARLSASSLR YYGLGLENGG YTVTLQFAEV QIEGSNSWKG IGRRRFNIYV
401: QGRLVEKDFD IRRTAGGSSV RAVQREYKTN VSENHLEVHL FWAGKGTCCI PIQGAYGPLI AAVSATPDFT PTVANRPPSK GKSRTGTIVG VIVGVGLLSI
501: FAGVVILVIR KRRKPYTDDE EILSMDVKPY TFTYSELKNA TQDFDLSNKL GEGGFGAVYK GNLNDGREVA VKQLSIGSRQ GKGQFVAEII AISSVLHRNL
601: VKLYGCCFEG DHRLLVYEYL PNGSLDQALF GDKSLHLDWS TRYEICLGVA RGLVYLHEEA SVRIIHRDVK ASNILLDSEL VPKVSDFGLA KLYDDKKTHI
701: STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RKNSDENLEE GKKYLLEWAW NLHEKNRDVE LIDDELSEYN MEEVKRMIGI ALLCTQSSYA
801: LRPPMSRVVA MLSGDAEVND ATSKPGYLTD CTFDDTTSSS FSNFQTKDTS FSTSFIAPGP EMPLRDGESK PMVGFKIKEG R

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.