Factsheet for VIT_11s0052g00700.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 6
mitochondrion 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088826	Potato	cytosol	52.42	75.8
Solyc07g006940.1.1	Tomato	plasma membrane	56.83	68.8
KRH02726	Soybean	golgi, mitochondrion, plasma membrane	61.45	64.58
KRH12373	Soybean	plasma membrane	60.79	63.59
KRH37374	Soybean	plasma membrane, plastid, vacuole	60.35	63.28
GSMUA_Achr10P...	Banana	plasma membrane	47.8	61.13
EES11585	Sorghum	plasma membrane	53.08	58.64
Os04t0658700-00	Rice	plasma membrane	53.3	58.31
TraesCS2A01G500700.1	Wheat	plasma membrane	52.86	56.6
TraesCS2B01G528600.1	Wheat	plasma membrane	52.64	56.37
HORVU2Hr1G111460.2	Barley	plasma membrane	52.86	56.34
Zm00001d001993_P001	Maize	plasma membrane	52.42	56.13
TraesCS2D01G500900.1	Wheat	plasma membrane	52.86	55.17
VIT_12s0055g00600.t01	Wine grape	mitochondrion, plasma membrane, plastid	6.61	51.72
VIT_12s0055g00610.t01	Wine grape	cytosol	15.86	47.06
VIT_10s0092g00520.t01	Wine grape	plasma membrane	31.28	42.77
VIT_12s0055g00640.t01	Wine grape	cytosol, mitochondrion, plastid	13.22	42.55
VIT_08s0007g02150.t01	Wine grape	cytosol	34.8	41.58
VIT_06s0004g06430.t01	Wine grape	cytosol	33.7	41.13
VIT_13s0019g04160.t01	Wine grape	cytosol	25.77	40.62
VIT_19s0014g01530.t01	Wine grape	mitochondrion	33.92	40.0
VIT_19s0027g00390.t01	Wine grape	cytosol	31.72	37.4
VIT_08s0040g01930.t01	Wine grape	cytosol, plastid	32.82	37.34
VIT_00s0370g00010.t01	Wine grape	cytosol	34.14	35.15
VIT_19s0014g00480.t01	Wine grape	cytosol	17.62	32.52
VIT_19s0014g00510.t01	Wine grape	plasma membrane	23.79	27.34
VIT_10s0092g00570.t01	Wine grape	mitochondrion, plasma membrane	35.68	17.36

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246157	wikigene:100246157	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CBI17854
ProteinID:CBI17854.3	UniProt:D7SQC3	EMBL:FN594964	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246157	wikigene:LOC100246157	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF21	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001BE1781	ArrayExpress:VIT_11s0052g00700	EnsemblPlantsGene:VIT_11s0052g00700	EnsemblPlants:VIT_11s0052g00700.t01
RefSeq:XP_002268362	RefSeq:XP_002268362.2	RefSeq:XP_010656849.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:-:18219560..18229608

Molecular Weight (calculated)

51205.8 Da

IEP (calculated)

8.454

GRAVY (calculated)

-0.213

Length

454 amino acids

Sequence
(BLAST)

001: MPRLLAEGCR PPHHSPALFF FLVAAVVLLI FLILILVSWK FKNLAELKKL VTETKRLQEA KDFCSGNLRT VGQFDFRSLK KATKNFHPSN LLGRGGFGPV
101: YRGKLRDGKL VAVKKLSLDK SQQGEAEFLA EVKMITSIQH KNLVRLLGCC SDGPQRLLVY EYMKNRSLDL IIYERNDQFL NWNTRFQIIL GIARGLQYLH
201: EDSHLRIVHR DIKASNILLD DRFQPRIGDF GLARFFPEDE AYLSTAFAGT LGYTAPEYAI RGELSEKADI YSFGVLVLEI IGCRKNTDLT LSSEMQYLPE
301: YAWKLYEKSR VIDLVDPRIQ EDGFVENHVL QVNHVLQVIH VALFCLQPYA NLRPPMSEVV AVLTCRADMV GTPMKPAFLD RKQDKNISSD TISEAFPSPL
401: HSDSPSSSQQ PKISEAFPSP LHSDSPSSSQ QPKISEAFPS PLHGDSPSSS QQPK

Best Arabidopsis Sequence Match ( AT1G56120.3 )
(BLAST)

001: MQWMTFGINA LSGPIPKEIG LLTDLRLLGI SSNNFSGSLP AEIGSCTKLQ QMYIDSSGLS GGIPLSFANF VELEVAWIMD VELTGRIPDF IGFWTKLTTL
101: RILGTGLSGP IPSSFSNLIA LTELRLGDIS NGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGGYTSLQ QVDLSFNKLH GPIPASLFNL SRLTHLFLGN
201: NTLNGSLPTL KGQSLSNLDV SYNDLSGSLP SWVSLPDLKL NLVANNFTLE GLDNRVLSGL HCLQKNFPCN RGEGIYYNFS INCGGPEIRS VSGALFEKED
301: ADLGPASFVV SAAKRWAASS VGNFAGSSNN IYIATSLAQF INTMDSELFQ SARLSASSLR YYGLGLENGG YTVTLQFAEV QIEGSNSWKG IGRRRFNIYV
401: QGRLVEKDFD IRRTAGGSSV RAVQREYKTN VSENHLEVHL FWAGKGTCCI PIQGAYGPLI AAVSATPDFT PTVANRPPSK GKSRTGTIVG VIVGVGLLSI
501: FAGVVILVIR KRRKPYTDDE EILSMDVKPY TFTYSELKNA TQDFDLSNKL GEGGFGAVYK GNLNDGREVA VKQLSIGSRQ GKGQFVAEII AISSVLHRNL
601: VKLYGCCFEG DHRLLVYEYL PNGSLDQALF GDKSLHLDWS TRYEICLGVA RGLVYLHEEA SVRIIHRDVK ASNILLDSEL VPKVSDFGLA KLYDDKKTHI
701: STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RKNSDENLEE GKKYLLEWAW NLHEKNRDVE LIDDELSEYN MEEVKRMIGI ALLCTQSSYA
801: LRPPMSRVVA MLSGDAEVND ATSKPGYLTD CTFDDTTSSS FSNFQTKDTS FSTSFIAPGP EMPLRDGESK PMVGFKIKEG R

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.