Factsheet for VIT_13s0019g04160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g00600.t01	Wine grape	mitochondrion, plasma membrane, plastid	12.15	60.34
VIT_12s0055g00610.t01	Wine grape	cytosol	23.96	45.1
VIT_08s0040g01930.t01	Wine grape	cytosol, plastid	57.99	41.85
VIT_19s0014g01530.t01	Wine grape	mitochondrion	52.43	39.22
VIT_19s0027g00390.t01	Wine grape	cytosol	50.35	37.66
VIT_06s0004g06430.t01	Wine grape	cytosol	47.22	36.56
VIT_08s0007g02150.t01	Wine grape	cytosol	47.57	36.05
VIT_10s0092g00520.t01	Wine grape	plasma membrane	41.32	35.84
VIT_00s0370g00010.t01	Wine grape	cytosol	47.22	30.84
VIT_12s0055g00640.t01	Wine grape	cytosol, mitochondrion, plastid	13.19	26.95
VIT_19s0014g00510.t01	Wine grape	plasma membrane	36.46	26.58
VIT_11s0052g00700.t01	Wine grape	plasma membrane	40.62	25.77
VIT_19s0014g00480.t01	Wine grape	cytosol	20.14	23.58
VIT_10s0092g00570.t01	Wine grape	mitochondrion, plasma membrane	46.53	14.36

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CBI31473	ProteinID:CBI31473.3	UniProt:D7TMA6
EMBL:FN595998	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF102	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE35FA	ArrayExpress:VIT_13s0019g04160
EnsemblPlantsGene:VIT_13s0019g04160	EnsemblPlants:VIT_13s0019g04160.t01	:	:	:	:

Description

No Description!

Coordinates

chr13:-:5456052..5458524

Molecular Weight (calculated)

32041.3 Da

IEP (calculated)

9.246

GRAVY (calculated)

-0.299

Length

288 amino acids

Sequence
(BLAST)

001: MKFPLACSEC FYPSSDDLHD NNGGRVIKSG LPTLQNAHAF TYNEIKIATG GFRSSDKIGQ GGFGSVYKGR LQDGTVVAVK VLSAESKQGD REFMSEMASI
101: SNINHENLVK LHGGCVHGAR RMLVYDYMQN NSLSHTLLRG EKRRAKFSWK TRREICLGIA RGLAYIHEDI TPHVVHRDIK ASNILLDGDF TPKISDFGLS
201: KLFYTNITHI TTRVAGTLGY LAPEYALSGH LTRKSDVYSF GVLILEIVSG RTAIDFDLDL GEHYLVQKVT PTTHNPQPHS HAIHLQRK

Best Arabidopsis Sequence Match ( AT1G16670.1 )
(BLAST)

001: MGCSWLSCHR REATEVDGEI AAIDNVKIYK YREIRQATDD FSAENKIGEG GFGSVYKGCL KDGKLAAIKV LSAESRQGVK EFLTEINVIS EIQHENLVKL
101: YGCCVEGNHR ILVYNFLENN SLDKTLLAGG YTRSGIQFDW SSRANICVGV AKGLAFLHEE VRPHIIHRDI KASNILLDKY LSPKISDFGL ARLMPPNMTH
201: VSTRVAGTIG YLAPEYAVRG QLTRKADIYS FGVLLMEIVS GRSNKNTRLP TEYQYLLERA WELYERNELV DLVDSGLNGV FDAEEACRYL KIGLLCTQDS
301: PKLRPSMSTV VRLLTGEKDI DYKKISRPGL ISDFMDLKVR GPVATKTEQV NRQNYTNPSS SSNGSSRDHS NAYSSGASSA NAGNTFSSTI

Arabidopsis Description

CRPK1Cold-responsive protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93YN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.