Factsheet for VIT_10s0092g00570.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00520.t01	Wine grape	plasma membrane	27.44	77.11
VIT_12s0055g00600.t01	Wine grape	mitochondrion, plasma membrane, plastid	4.72	75.86
VIT_12s0055g00640.t01	Wine grape	cytosol, mitochondrion, plastid	10.93	72.34
VIT_12s0055g00610.t01	Wine grape	cytosol	11.36	69.28
Os04t0616600-01	Rice	plasma membrane	16.83	58.8
GSMUA_AchrUn_...	Banana	cytosol	25.4	58.09
VIT_13s0019g04160.t01	Wine grape	cytosol	14.36	46.53
VIT_06s0004g06430.t01	Wine grape	cytosol	17.9	44.89
VIT_19s0014g01530.t01	Wine grape	mitochondrion	18.11	43.9
VIT_19s0027g00390.t01	Wine grape	cytosol	18.11	43.9
VIT_19s0014g00480.t01	Wine grape	cytosol	11.36	43.09
VIT_08s0007g02150.t01	Wine grape	cytosol	17.26	42.37
VIT_08s0040g01930.t01	Wine grape	cytosol, plastid	17.68	41.35
VIT_00s0370g00010.t01	Wine grape	cytosol	18.54	39.23
VIT_19s0014g00510.t01	Wine grape	plasma membrane	15.97	37.72
VIT_11s0052g00700.t01	Wine grape	plasma membrane	17.36	35.68

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100259563	wikigene:100259563	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20
Gene3D:3.80.10.10	ProteinID:CCB61507	ProteinID:CCB61507.1	UniProt:F6I3I9	EMBL:FN596741	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100259563	wikigene:LOC100259563	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Malectin	PFAM:PF07714
PFAM:PF11721	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27006	PANTHER:PTHR27006:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000210942B	ArrayExpress:VIT_10s0092g00570
EnsemblPlantsGene:VIT_10s0092g00570	EnsemblPlants:VIT_10s0092g00570.t01	RefSeq:XP_002272816	RefSeq:XP_002272816.2	SEG:seg	:

Description

No Description!

Coordinates

chr10:-:12136607..12150437

Molecular Weight (calculated)

102875.0 Da

IEP (calculated)

7.558

GRAVY (calculated)

-0.107

Length

933 amino acids

Sequence
(BLAST)

001: MYNIFRRVHA LNKRGVIVEE FKAFTYLMVL KLDKNYFTGP LPSFIGNLSQ LTYLSVSHNA LSGTIPKELG NLKELLMLSI GSNNFSGTLP PEIGNLVKLQ
101: QIYIDSSGVS GEIPSTFAKL QDMVVMFATD VPITGKIPDF IGNWTKLESL RFQGNSLEGP IPSSFSKLTS LTTLRISDLS NVSSSLDFIK EMKNLTDLVL
201: RNSLISGSIP FYIGEFQSLK TLDLSFNNLT GEIPDALFNL SSLTSLFLGT NRLSGTFPAQ KSEQLQTIDL SYNELSGSFP SWLKSGLQFI FEGLECLQRN
301: FPCNRDPPPY TNVSIKCGGP EWRTPDGTVY EADNSITTGT ASTSYYVSRL ENWGVSNVGL YSDRIAYKTE VSGTNHPELF KTSRISPGSL RYYGLGLQNG
401: HYTVSLQFAE MELKDQSAQT WESIGRRVFD IYIQGTLQLK DFDITKEAGG VERAIERKFN AVVSQNYLEI HLFWAGKGTC CIPFEGYYGP SISALSVVSD
501: LKRVPTTTPP KKGYTGLIAG IVAAIGILSF ILIICAVFYV KWKASNLNKD IVLLGVGPRP NTFRYAELRT ATENFSATNK LGEGGFGSVY KGTLPDGRVV
601: AVKELTVASQ HGKSQFITEI ATISAVQHRN LVKLYGFCIK GNRRLLVYEY LENRSLDHSL FGKNNLHLDW PTRFNVCLAT ARALAYLHEE SRPRIVHRDV
701: KASNILLDED LCPKISDFGL AKLYDDKKTH ISTRIAGTIG YLAPEYAMRG HLTEKADVFS FGVVALEILS GRPNTDNSLD AKMIYLLEWA WALHENNRSL
801: DLIDPRLTAF DENEAIRVVG VALLCTQASP VLRPTMSRVV AMLAGDIEVS TVASKPSYLT DWDFNDATSS FLSEDTQTSS AFNKSASNPT SFASNKSTSN
901: PTSFASNKGT SNPTPSPVNI SEPMLHGIIG AGR

Best Arabidopsis Sequence Match ( AT1G56120.2 )
(BLAST)

0001: MLRLRRSLFL LLTVWFLCCS GLVHVMVRAQ NRTRPTTHPD DARALNSIFA AWKIRAPREW NISGELCSGV AIDASVLDSN HAYNPLIKCD CSFQNSTICR
0101: INNIKVYAID VVGPIPPELW TLTYLTNLNL GQNYLTGSLS PAIGNLTRMQ WMTFGINALS GPIPKEIGLL TDLRLLGISS NNFSGSLPAE IGSCTKLQQM
0201: YIDSSGLSGG IPLSFANFVE LEVAWIMDVE LTGRIPDFIG FWTKLTTLRI LGTGLSGPIP SSFSNLIALT ELRLGDISNG SSSLDFIKDM KSLSVLVLRN
0301: NNLTGTIPST IGGYTSLQQV DLSFNKLHGP IPASLFNLSR LTHLFLGNNT LNGSLPTLKG QSLSNLDVSY NDLSGSLPSW VSLPDLKLNL VANNFTLEGL
0401: DNRVLSGLHC LQKNFPCNRG EGIYYNFSIN CGGPEIRSVS GALFEKEDAD LGPASFVVSA AKRWAASSVG NFAGSSNNIY IATSLAQFIN TMDSELFQSA
0501: RLSASSLRYY GLGLENGGYT VTLQFAEVQI EGSNSWKGIG RRRFNIYVQG RLVEKDFDIR RTAGGSSVRA VQREYKTNVS ENHLEVHLFW AGKGTCCIPI
0601: QGAYGPLIAA VSATPDFTPT VANRPPSKGK SRTGTIVGVI VGVGLLSIFA GVVILVIRKR RKPYTDDEEI LSMDVKPYTF TYSELKNATQ DFDLSNKLGE
0701: GGFGAVYKGN LNDGREVAVK QLSIGSRQGK GQFVAEIIAI SSVLHRNLVK LYGCCFEGDH RLLVYEYLPN GSLDQALFGD KSLHLDWSTR YEICLGVARG
0801: LVYLHEEASV RIIHRDVKAS NILLDSELVP KVSDFGLAKL YDDKKTHIST RVAGTIGYLA PEYAMRGHLT EKTDVYAFGV VALELVSGRK NSDENLEEGK
0901: KYLLEWAWNL HEKNRDVELI DDELSEYNME EVKRMIGIAL LCTQSSYALR PPMSRVVAML SGDAEVNDAT SKPGYLTDCT FDDTTSSSFS NFQTKDTSFS
1001: TSFIAPGPEM PLRDGESKPM VGFKIKEGR

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.