Factsheet for GSMUA_AchrUn_randomP19810_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g00600.t01	Wine grape	mitochondrion, plasma membrane, plastid	10.54	74.14
VIT_12s0055g00640.t01	Wine grape	cytosol, mitochondrion, plastid	23.53	68.09
VIT_10s0092g00520.t01	Wine grape	plasma membrane	50.49	62.05
Os04t0616600-01	Rice	plasma membrane	38.48	58.8
VIT_12s0055g00610.t01	Wine grape	cytosol	20.1	53.59
Bra005431.1-P	Field mustard	cytosol	19.36	48.47
CDY17240	Canola	cytosol	18.38	43.35
GSMUA_Achr3P14290_001	Banana	cytosol	39.71	42.86
GSMUA_Achr1P17640_001	Banana	cytosol	39.46	42.59
GSMUA_Achr8P33290_001	Banana	cytosol	38.48	41.64
GSMUA_Achr7P08000_001	Banana	cytosol	38.24	41.16
GSMUA_Achr6P30040_001	Banana	mitochondrion	38.24	40.62
GSMUA_Achr11P...	Banana	cytosol	37.5	40.26
GSMUA_AchrUn_...	Banana	mitochondrion	37.5	40.05
GSMUA_Achr3P23320_001	Banana	cytosol, mitochondrion	38.24	39.49
GSMUA_Achr10P...	Banana	plasma membrane	34.31	39.44
CDY45112	Canola	plasma membrane	37.99	38.75
CDY24096	Canola	plasma membrane	37.5	38.25
Bra039671.1-P	Field mustard	plasma membrane	37.5	38.25
GSMUA_Achr2P01370_001	Banana	cytosol	35.78	38.12
GSMUA_Achr8P07140_001	Banana	mitochondrion	36.52	37.72
GSMUA_Achr1P25690_001	Banana	cytosol, plasma membrane, plastid	36.76	37.22
CDY32337	Canola	plasma membrane	14.22	27.75
VIT_10s0092g00570.t01	Wine grape	mitochondrion, plasma membrane	58.09	25.4
CDX79313	Canola	cytosol, plasma membrane, plastid	26.23	22.2
KRH71580	Soybean	plasma membrane	10.05	20.81
Bra027302.1-P	Field mustard	plasma membrane	39.46	17.16
CDX96812	Canola	cytosol	0.98	9.52
CDX98500	Canola	nucleus, plasma membrane, plastid	8.33	7.57
Zm00001d034408_P001	Maize	cytosol	2.21	3.69
Zm00001d035769_P001	Maize	cytosol	0.74	3.16

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG19810_001
EnsemblPlants:GSMUA_AchrUn_randomP19810_001	EnsemblPlants:GSMUA_AchrUn_randomT19810_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0UAP0	PFAM:PF07714
PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF1	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295ECEC	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19810_001]

Coordinates

chrchrUn_random:-:96059735..96062398

Molecular Weight (calculated)

45614.1 Da

IEP (calculated)

8.156

GRAVY (calculated)

-0.166

Length

408 amino acids

Sequence
(BLAST)

001: MHIGKKKHTD IANQPTKVSQ NDQCLPPILA WNTCQTQTKH MDTEASHSAK LRTNQNPLIL LGKLFDGRTV AVKQLSAASN QGKRQFMTEI AIISSVQHRN
101: LVKLYGCCVE GGKRLVVYEY LENKSLDQAI FGKNNLHLDW PIRFEICLGI ARALAYLHEE SRVRIVHRDV KASNILLDAN LNPKISDFGL AKLYDDNKTH
201: ISTRVAGTIG YLAPEYAMRG HLTEKADVFA FGVVALEVLS GRSNADQTLK NEKVYLLEWA WNLREKQCEL ELVDPKLLTF DEAQAIRVIN VALLCTQASP
301: MLRPSMSRIV AMLTGDIEVS EVKSRPGYLT DWQYNDLSSN FASCGLSEPV ISGSENERFS TVSSTSMVHN IGSSASPTLP MLEVIGDGRI ILSRWNLWKI
401: VVDCQKIM

Best Arabidopsis Sequence Match ( AT1G56120.3 )
(BLAST)

001: MQWMTFGINA LSGPIPKEIG LLTDLRLLGI SSNNFSGSLP AEIGSCTKLQ QMYIDSSGLS GGIPLSFANF VELEVAWIMD VELTGRIPDF IGFWTKLTTL
101: RILGTGLSGP IPSSFSNLIA LTELRLGDIS NGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGGYTSLQ QVDLSFNKLH GPIPASLFNL SRLTHLFLGN
201: NTLNGSLPTL KGQSLSNLDV SYNDLSGSLP SWVSLPDLKL NLVANNFTLE GLDNRVLSGL HCLQKNFPCN RGEGIYYNFS INCGGPEIRS VSGALFEKED
301: ADLGPASFVV SAAKRWAASS VGNFAGSSNN IYIATSLAQF INTMDSELFQ SARLSASSLR YYGLGLENGG YTVTLQFAEV QIEGSNSWKG IGRRRFNIYV
401: QGRLVEKDFD IRRTAGGSSV RAVQREYKTN VSENHLEVHL FWAGKGTCCI PIQGAYGPLI AAVSATPDFT PTVANRPPSK GKSRTGTIVG VIVGVGLLSI
501: FAGVVILVIR KRRKPYTDDE EILSMDVKPY TFTYSELKNA TQDFDLSNKL GEGGFGAVYK GNLNDGREVA VKQLSIGSRQ GKGQFVAEII AISSVLHRNL
601: VKLYGCCFEG DHRLLVYEYL PNGSLDQALF GDKSLHLDWS TRYEICLGVA RGLVYLHEEA SVRIIHRDVK ASNILLDSEL VPKVSDFGLA KLYDDKKTHI
701: STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RKNSDENLEE GKKYLLEWAW NLHEKNRDVE LIDDELSEYN MEEVKRMIGI ALLCTQSSYA
801: LRPPMSRVVA MLSGDAEVND ATSKPGYLTD CTFDDTTSSS FSNFQTKDTS FSTSFIAPGP EMPLRDGESK PMVGFKIKEG R

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.