CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32337	Canola	plasma membrane	23.61	50.72
KRH71580	Soybean	plasma membrane	17.15	39.09
CDY39111	Canola	cytosol	11.14	24.04
CDY45112	Canola	plasma membrane	16.7	18.75
CDY24096	Canola	plasma membrane	16.7	18.75
CDY50994	Canola	cytosol	12.25	15.03
CDX81773	Canola	cytosol	12.92	14.68
CDY50993	Canola	cytosol	12.69	14.62
CDX81772	Canola	cytosol	12.47	14.21
CDY40041	Canola	cytosol	12.03	13.64
CDY35110	Canola	cytosol	11.8	13.38
CDX83948	Canola	cytosol	11.8	13.32
CDX73951	Canola	cytosol	10.91	12.56
CDY07897	Canola	cytosol	10.91	12.56
CDY17240	Canola	cytosol	4.45	11.56
CDX96813	Canola	cytosol	11.8	9.65
GSMUA_AchrUn_...	Banana	cytosol	7.57	8.33
CDX79313	Canola	cytosol, plasma membrane, plastid	5.35	4.98
Os04t0616600-01	Rice	plasma membrane	1.11	1.87
CDX96812	Canola	cytosol	0.0	0.0
Zm00001d034408_P001	Maize	cytosol	0.0	0.0
Zm00001d035769_P001	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:A0A078E8U6	EnsemblPlants:CDX98500	ProteinID:CDX98500
ProteinID:CDX98500.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00106140001	InterPro:IPR000719	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Malectin	PFAM:PF07714	PFAM:PF11721	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF11	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
UniParc:UPI0004EEA58E	:	:	:	:	:

Description

BnaC05g38750D

Coordinates

chrLK031905:+:634373..638133

Molecular Weight (calculated)

49652.5 Da

IEP (calculated)

9.591

GRAVY (calculated)

-0.326

Length

449 amino acids

Sequence
(BLAST)

001: MGSLATCKHI SGKLPQELGN LPNIQRIFLS SNYLSGDIPS IFSKLTTLID LRISELSGPG SPFPPLQNMT SIKTLFLTSN MLNGEVPSWM VDNGDKIDLI
101: YNNFTNDPRT AECQKNAVNM FSSTSPLVAN DYSNVSCLSS YICPKNKYLK LYTHHNTISP KILQPFYGLH INCGGIELTV NGTKYDADST DRPIFYDSRN
201: GWVSSNTGKF MDDERSPKGV TFGANTFNIV DEAKGVGRAV VKSFLVMITN GKLEIRLFWA GKGTQATPVR DFIPPKEAGT GSGCCCSCFD GVICGFNRLY
301: ITVERLLKTQ ESNGKSVSCL SSDFKNLDFK ISSFSLRQIK VATNNFDPAN KIGEGGFGPV HKGTLTDGTV IAVKQLSSKS KQGNREFLNE IGMISALQHP
401: HLVKLYGCCV DGHYKVTTRK QRHSERKNRR YVVGITLFRR HTDKTSPRK

Best Arabidopsis Sequence Match ( AT1G29730.1 )
(BLAST)

001: MSAAYNLMIK SKSCLFSSSI LFVVTLIYLL CTVSASPSLH PDEVEALKDI TETLGVKHLN LSEDPCLTKT LVISQGVLKE GQNSTIRCDC HFNNYSTCHI
101: KHFVLQKFNL PGRLPPMLYK FRHLESIDLY NNYLYGSIPM EWASLPYLKS ISVCANRLSG DIPKGLGKFI NLTLLVLEAN QFSGTIPKEL GNLVNLQGLG
201: LSSNQLVGGL PKTLAKLTKL TNLHLSDNRL NGSIPEFIGK LPKLQRLELY ASGLRGPIPD SIFHLENLID VRISDTVAGL GHVPQITSTS LKYLVLRNIN
301: LSGPIPTSIW DLPSLMTLDL SFNRLTGEIP AYATAPKYTY LAGNMLSGKV ETGAFLTAST NIDLSYNNFT WSPMCKERKN INTYESSHSK NRLTRLLPCS
401: AIKQCQNYSR SLHINCGGPD VTIENSRGRF LYEGDNYGLT GSATNYYRKN WGYSNTGDFM DDAITEDTYT VSSESAVSAK YPDLYQNARR SPLSLAYYAF
501: CFENGSYNVK LHFAEIQFSD VEPYTKLAKR VFNIYIQGKL IWEDFSIREE ANGTHKEVIR EVNTTVTDNT LEIRLYWAGK GTMIIPQRGY YGSLISAVSV
601: CPSSESECGG MKKKISKLKG PDLRTGSFSL RQLKVATNDF DPLNKIGEGG FGSVYKGRLP DGTLIAVKKL SSKSHQGNKE FVNEIGMIAC LQHPNLVKLY
701: GCCVEKNQLL LVYEYLENNC LSDALFAGRS CLKLEWGTRH KICLGIARGL AFLHEDSAVK IIHRDIKGTN VLLDKDLNSK ISDFGLARLH EDNQSHITTR
801: VAGTIGYMAP EYAMRGHLTE KADVYSFGVV AMEIVSGKSN AKYTPDDECC VGLLDWAFVL QKKGDIAEIL DPRLEGMFDV MEAERMIKVS LLCANKSSTL
901: RPNMSQVVKM LEGETEIEQI ISDPGVYSDN LHFKPSSLSS DYILSIPSSS ESAYDLYPLS PESIVFTIQ

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:TAIR;Acc:AT1G29730]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.