Factsheet for Os04t0616600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g00600.t01	Wine grape	mitochondrion, plasma membrane, plastid	14.23	65.52
VIT_12s0055g00640.t01	Wine grape	cytosol, mitochondrion, plastid	31.84	60.28
VIT_10s0092g00520.t01	Wine grape	plasma membrane	53.18	42.77
Bra005431.1-P	Field mustard	cytosol	25.84	42.33
GSMUA_AchrUn_...	Banana	cytosol	58.8	38.48
CDY17240	Canola	cytosol	24.72	38.15
CDY45112	Canola	plasma membrane	46.44	31.0
Bra039671.1-P	Field mustard	plasma membrane	46.07	30.75
CDY24096	Canola	plasma membrane	45.69	30.5
Os04t0619400-01	Rice	plasma membrane	41.95	30.11
Os08t0200500-01	Rice	plasma membrane	41.2	29.81
Os02t0165100-01	Rice	plasma membrane	41.95	28.87
Os04t0679200-01	Rice	cytosol	42.7	28.86
Os03t0264300-00	Rice	plasma membrane	41.95	28.57
Os06t0676600-01	Rice	plasma membrane	40.82	28.53
Os02t0639100-00	Rice	cytosol	38.58	27.91
Os04t0658700-00	Rice	plasma membrane	41.95	26.99
VIT_12s0055g00610.t01	Wine grape	cytosol	13.48	23.53
CDX79313	Canola	cytosol, plasma membrane, plastid	33.71	18.67
VIT_10s0092g00570.t01	Wine grape	mitochondrion, plasma membrane	58.8	16.83
Os12t0611100-01	Rice	plasma membrane	6.37	16.5
Bra027302.1-P	Field mustard	plasma membrane	44.94	12.79
CDY32337	Canola	plasma membrane	8.99	11.48
Zm00001d035769_P001	Maize	cytosol	2.25	6.32
KRH71580	Soybean	plasma membrane	4.12	5.58
Zm00001d034408_P001	Maize	cytosol	3.75	4.1
CDX96812	Canola	cytosol	0.37	2.38
CDX98500	Canola	nucleus, plasma membrane, plastid	1.87	1.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	ProteinID:BAF15794.1	ProteinID:BAS91016.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os04g0616600	EnsemblPlants:Os04t0616600-01	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF15	InterPro:Prot_kinase_dom	UniProt:Q0JA43	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0000DD928D	SEG:seg	:	:

Description

Serine/threonine protein kinase-related domain containing protein. (Os04t0616600-01)

Coordinates

chr4:-:31308749..31310236

Molecular Weight (calculated)

29866.5 Da

IEP (calculated)

4.744

GRAVY (calculated)

-0.202

Length

267 amino acids

Sequence
(BLAST)

001: MVAALKANIH CWFYEYLENG SLDKALFGTE KLNIDWPARF EICLGIARGL AYLHEESSIR VIHRDIKASN VLLDANLNPK ISDFGLAKLY DDKKTHVSTK
101: VAGTFGYLAP EYAMRGRMTE KVDVFAFGVV LLEILAGRPN YDDALEEDKI YIFEWAWDLY ENNNPLGLVD PKLEEFNREE VLRAIRVALL CTQGSPHQRP
201: PMSRVVTMLA GDVEAPEVVT KPSYITEWQL KGGDTSYLDS EVSWQSSSAP GGPASPRTSS PFLSSVD

Best Arabidopsis Sequence Match ( AT1G56120.3 )
(BLAST)

001: MQWMTFGINA LSGPIPKEIG LLTDLRLLGI SSNNFSGSLP AEIGSCTKLQ QMYIDSSGLS GGIPLSFANF VELEVAWIMD VELTGRIPDF IGFWTKLTTL
101: RILGTGLSGP IPSSFSNLIA LTELRLGDIS NGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGGYTSLQ QVDLSFNKLH GPIPASLFNL SRLTHLFLGN
201: NTLNGSLPTL KGQSLSNLDV SYNDLSGSLP SWVSLPDLKL NLVANNFTLE GLDNRVLSGL HCLQKNFPCN RGEGIYYNFS INCGGPEIRS VSGALFEKED
301: ADLGPASFVV SAAKRWAASS VGNFAGSSNN IYIATSLAQF INTMDSELFQ SARLSASSLR YYGLGLENGG YTVTLQFAEV QIEGSNSWKG IGRRRFNIYV
401: QGRLVEKDFD IRRTAGGSSV RAVQREYKTN VSENHLEVHL FWAGKGTCCI PIQGAYGPLI AAVSATPDFT PTVANRPPSK GKSRTGTIVG VIVGVGLLSI
501: FAGVVILVIR KRRKPYTDDE EILSMDVKPY TFTYSELKNA TQDFDLSNKL GEGGFGAVYK GNLNDGREVA VKQLSIGSRQ GKGQFVAEII AISSVLHRNL
601: VKLYGCCFEG DHRLLVYEYL PNGSLDQALF GDKSLHLDWS TRYEICLGVA RGLVYLHEEA SVRIIHRDVK ASNILLDSEL VPKVSDFGLA KLYDDKKTHI
701: STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RKNSDENLEE GKKYLLEWAW NLHEKNRDVE LIDDELSEYN MEEVKRMIGI ALLCTQSSYA
801: LRPPMSRVVA MLSGDAEVND ATSKPGYLTD CTFDDTTSSS FSNFQTKDTS FSTSFIAPGP EMPLRDGESK PMVGFKIKEG R

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.