Factsheet for Bra039671.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
nucleus 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45112	Canola	plasma membrane	98.5	98.5
CDY24096	Canola	plasma membrane	98.5	98.5
Bra005431.1-P	Field mustard	cytosol	24.25	59.51
VIT_19s0014g00480.t01	Wine grape	cytosol	30.5	49.59
Os04t0616600-01	Rice	plasma membrane	30.75	46.07
VIT_19s0014g00510.t01	Wine grape	plasma membrane	42.75	43.29
Bra034047.1-P	Field mustard	cytosol	38.5	42.66
Bra026710.1-P	Field mustard	cytosol	39.5	40.51
Bra001333.1-P	Field mustard	cytosol	38.5	39.49
Bra026032.1-P	Field mustard	cytosol	39.0	39.39
Bra026711.1-P	Field mustard	cytosol	38.25	38.73
GSMUA_AchrUn_...	Banana	cytosol	38.25	37.5
KRH71580	Soybean	plasma membrane	18.0	36.55
Bra027302.1-P	Field mustard	plasma membrane	64.0	27.29
Bra016636.1-P	Field mustard	cytosol	39.0	24.68
Zm00001d035769_P001	Maize	cytosol	1.0	4.21
Zm00001d034408_P001	Maize	cytosol	2.0	3.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra039671	EnsemblPlants:Bra039671.1	EnsemblPlants:Bra039671.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M4FEZ9	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF101	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000253E7F0	SEG:seg	:	:

Description

AT1G53420 (E=1e-166) | serine/threonine protein kinase-related

Coordinates

chrA06:+:610521..612035

Molecular Weight (calculated)

45219.9 Da

IEP (calculated)

7.126

GRAVY (calculated)

-0.210

Length

400 amino acids

Sequence
(BLAST)

001: MVCTIENAAV HGAAVMVYII MIVLIFILIY IVCKRRSLRS KTHVEGEFKS LDPMINSFSL RQIKAATNNF DTANRIGEGG FGPVHKGKLP DGTIIAVKQL
101: STGSKQGNRE FLNEIGMITA LHHPNLVKLY GCCVEGDQLL LVYEYVENNC LARALFGPQE TQLRLDWPTR RKICIGVARG LAYLHEESRI KIVHRDIKAT
201: NVLLDKEMNS KISDFGLAKL NEDDNTHIST RVAGTFGYMA PEYAMRGHLT DKVDVYSFGI VALEIVHGRS NKINQSASNY NTPYVIDWVT ILREQNNLLE
301: LVDPRLGSDY NREEALTMLH VVILCTSPDP SDRPLMSEVV KMLEGKKMVE LERLEEASEY RETKRLENMN TMKKYYEMIG SETSMTMTMT LTDQTTSSKH

Best Arabidopsis Sequence Match ( AT1G07650.4 )
(BLAST)

001: MRISDNNFTG PIPDFISNWT RILKLQMHGC GLDGPIPSSI SSLTSLTDLR ISDLGGKPSS FPPLKNLESI KTLILRKCKI IGPIPKYIGD LKKLKTLDLS
101: FNLLSGEIPS SFENMKKADF IYLTGNKLTG GVPNYFVERN KNVDVSFNNF TDESSIPSHD CNRVTSNLVE SFALGNKSHK GSTCFLQRMP CVHPKRYHLY
201: KLYINCGGGE VKVDKEITYQ ADDEPKGASM YVLGANKRWA LSSTGNFMDN DDDADEYTVQ NTSRLSVNAS SPSFGLYRTA RVSPLSLTYY GICLGNGNYT
301: VNLHFAEIIF TDDNTLYSLG KRLFDIYVQD QLVIKNFNIQ EAARGSGKPI IKSFLVNVTD HTLKIGLRWA GKGTTGIPIR GVYGPMISAI SVEPNFKPPV
401: YYDTKDIILK VGVPVAAATL LLFIIVGVFW KKRRDKNDID KELRGLDLQT GTFTLRQIKA ATDNFDVTRK IGEGGFGSVY KGELSEGKLI AVKQLSAKSR
501: QGNREFVNEI GMISALQHPN LVKLYGCCVE GNQLILVYEY LENNCLSRAL FGKDESSRLK LDWSTRKKIF LGIAKGLTFL HEESRIKIVH RDIKASNVLL
601: DKDLNAKISD FGLAKLNDDG NTHISTRIAG TIGYMAPEYA MRGYLTEKAD VYSFGVVALE IVSGKSNTNF RPTEDFVYLL DWAYVLQERG SLLELVDPTL
701: ASDYSEEEAM LMLNVALMCT NASPTLRPTM SQVVSLIEGK TAMQELLSDP SFSTVNPKLK ALRNHFWQNE LSRSLSFSTS GPRTASANSL VDAEEKTGLL
801: D

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.