Factsheet for VIT_19s0014g00510.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0014g00480.t01	Wine grape	cytosol	34.43	55.28
VIT_12s0055g00610.t01	Wine grape	cytosol	19.75	50.98
Bra005431.1-P	Field mustard	cytosol	20.25	49.08
Bra039671.1-P	Field mustard	plasma membrane	43.29	42.75
VIT_10s0092g00520.t01	Wine grape	plasma membrane	31.9	37.95
KRH71580	Soybean	plasma membrane	18.23	36.55
VIT_13s0019g04160.t01	Wine grape	cytosol	26.58	36.46
VIT_12s0055g00600.t01	Wine grape	mitochondrion, plasma membrane, plastid	5.06	34.48
VIT_19s0027g00390.t01	Wine grape	cytosol	32.15	32.99
VIT_06s0004g06430.t01	Wine grape	cytosol	30.13	31.99
VIT_19s0014g01530.t01	Wine grape	mitochondrion	30.63	31.43
VIT_08s0007g02150.t01	Wine grape	cytosol	29.62	30.79
VIT_08s0040g01930.t01	Wine grape	cytosol, plastid	28.1	27.82
VIT_00s0370g00010.t01	Wine grape	cytosol	28.86	25.85
VIT_11s0052g00700.t01	Wine grape	plasma membrane	27.34	23.79
VIT_12s0055g00640.t01	Wine grape	cytosol, mitochondrion, plastid	8.35	23.4
Bra027302.1-P	Field mustard	plasma membrane	48.61	20.47
CDX79313	Canola	cytosol, plasma membrane, plastid	24.56	20.12
VIT_10s0092g00570.t01	Wine grape	mitochondrion, plasma membrane	37.72	15.97
Zm00001d035769_P001	Maize	cytosol	0.76	3.16
Zm00001d034408_P001	Maize	cytosol	0.51	0.82

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CCB46202	ProteinID:CCB46202.1	UniProt:F6H2L5
EMBL:FN595229	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PFAM:PF14416	InterPro:PMR5_N_dom	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF11	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002108CB1	ArrayExpress:VIT_19s0014g00510	EnsemblPlantsGene:VIT_19s0014g00510	EnsemblPlants:VIT_19s0014g00510.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr19:-:524432..528866

Molecular Weight (calculated)

44015.1 Da

IEP (calculated)

7.684

GRAVY (calculated)

-0.088

Length

395 amino acids

Sequence
(BLAST)

001: MGSWVQGVLF IFVVVVCIGN AVGSGEKCDF FQGIWVRDET YPLYKAEECP FIEREFNCQR NGRMDDLYLK FRWQPQGYFI PPSRNGSTSI SVSVVVGIVA
101: GVILLVFLVI GILWWRGCLR RKDTLEQDLK GLDQQTGLFT LRQIKAATNN LDAANKIGEV GFGSVYKGLL SDGTIIAVKQ LSSKSKQGNR EFVNEIGMIS
201: ALQHPHLVKL YGCCIEGNQL LLIYDLARAL FGPEECQLQL DWPTRHRICV GIARGLAYLH EESRLKIIHR DIKATNVLLD KNLNPKISDF GLAKLDEEDN
301: THISTGNAGA FFGIVALEIV SGRRNTTYRP KEECIYLLDW ALSLKGEGNL MDLVDPRLGS RLQQGRGHGN DQHSSPVHKG LSSSQASYVI SCEHA

Best Arabidopsis Sequence Match ( AT1G07650.4 )
(BLAST)

001: MRISDNNFTG PIPDFISNWT RILKLQMHGC GLDGPIPSSI SSLTSLTDLR ISDLGGKPSS FPPLKNLESI KTLILRKCKI IGPIPKYIGD LKKLKTLDLS
101: FNLLSGEIPS SFENMKKADF IYLTGNKLTG GVPNYFVERN KNVDVSFNNF TDESSIPSHD CNRVTSNLVE SFALGNKSHK GSTCFLQRMP CVHPKRYHLY
201: KLYINCGGGE VKVDKEITYQ ADDEPKGASM YVLGANKRWA LSSTGNFMDN DDDADEYTVQ NTSRLSVNAS SPSFGLYRTA RVSPLSLTYY GICLGNGNYT
301: VNLHFAEIIF TDDNTLYSLG KRLFDIYVQD QLVIKNFNIQ EAARGSGKPI IKSFLVNVTD HTLKIGLRWA GKGTTGIPIR GVYGPMISAI SVEPNFKPPV
401: YYDTKDIILK VGVPVAAATL LLFIIVGVFW KKRRDKNDID KELRGLDLQT GTFTLRQIKA ATDNFDVTRK IGEGGFGSVY KGELSEGKLI AVKQLSAKSR
501: QGNREFVNEI GMISALQHPN LVKLYGCCVE GNQLILVYEY LENNCLSRAL FGKDESSRLK LDWSTRKKIF LGIAKGLTFL HEESRIKIVH RDIKASNVLL
601: DKDLNAKISD FGLAKLNDDG NTHISTRIAG TIGYMAPEYA MRGYLTEKAD VYSFGVVALE IVSGKSNTNF RPTEDFVYLL DWAYVLQERG SLLELVDPTL
701: ASDYSEEEAM LMLNVALMCT NASPTLRPTM SQVVSLIEGK TAMQELLSDP SFSTVNPKLK ALRNHFWQNE LSRSLSFSTS GPRTASANSL VDAEEKTGLL
801: D

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.