CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17240	Canola	cytosol	16.18	45.09
VIT_19s0014g00480.t01	Wine grape	cytosol	18.88	36.99
Os04t0616600-01	Rice	plasma membrane	18.67	33.71
CDY24096	Canola	plasma membrane	25.31	30.5
CDY45112	Canola	plasma membrane	25.1	30.25
CDY39111	Canola	cytosol	12.03	27.88
CDX81772	Canola	cytosol	22.61	27.66
CDY50993	Canola	cytosol	22.2	27.44
CDY35110	Canola	cytosol	22.2	27.02
CDX81773	Canola	cytosol	21.99	26.84
CDY40041	Canola	cytosol	21.99	26.77
GSMUA_AchrUn_...	Banana	cytosol	22.2	26.23
CDX83948	Canola	cytosol	21.16	25.63
CDX73951	Canola	cytosol	20.33	25.13
CDY07897	Canola	cytosol	20.33	25.13
VIT_19s0014g00510.t01	Wine grape	plasma membrane	20.12	24.56
CDY50994	Canola	cytosol	17.84	23.5
CDX96813	Canola	cytosol	21.58	18.94
CDY32337	Canola	plasma membrane	7.26	16.75
CDX98500	Canola	nucleus, plasma membrane, plastid	4.98	5.35
CDX96812	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:2.60.120.430	Gene3D:3.80.10.10	MapMan:50.2.7	GO:A0A078CVV9	EnsemblPlants:CDX79313
ProteinID:CDX79313	ProteinID:CDX79313.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00131985001	InterPro:IPR000719
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Malectin	PFAM:PF00069	PFAM:PF11721
PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF11	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	UniParc:UPI0004EF2F7D	SEG:seg	:	:	:

Description

BnaC06g19900D

Coordinates

chrLK031817:+:1266070..1272852

Molecular Weight (calculated)

54019.3 Da

IEP (calculated)

7.599

GRAVY (calculated)

-0.230

Length

482 amino acids

Sequence
(BLAST)

001: MRRILVFVET NDLSRNYLNG SIPPEWGTLQ LINLILSSNY LTGDIPSTFS KPTALTDLRI SNNSLPELYQ ISSRTGQNLQ NSLYDLHINC GGDELTISGT
101: KYEADNSDSI YDDSRTTWVS SNTGRFLDVE RHLKVPTIWT NTSEPSSLYT DARLSAISLT YYAFCLGEGS YTVNLHFAET GKLEVKDFDI VSEAKGAGRA
201: VVKSFQAMVT NGTLEIRLFW ALKLFLFHWW WNLYWHNSRR FVGVSCALHG WHFMVERLLE TQESDGERSL FGPLETRIQL DWPIRQKICV GIASGLAYLH
301: GESRLKIVQR DIKATNVLLD KELNLKISDF GLAKLDEEEN THMSTQAAGT YGYMVPEYAM RGHLTDKADV YSFGGVVALE IVHGRSSTSA QSVYLLIDWL
401: ICPVPSRTAA GSSSSGSRRV RPARAAVLKM ADQTRESRNG DLGLRVFKIP QVKPIPLSTR PAFDPSRFEP VPRGPQICGL TK

Best Arabidopsis Sequence Match ( AT1G53420.1 )
(BLAST)

001: MSLNRFLFTS FSFFLFFIVH FASSATLPTQ EGEAFKVVLT TLKKTNIDLN VDPCEVSSTG NEWSTISRNL KRENLQGSLP KELVGLPLLQ EIDLSRNYLN
101: GSIPPEWGVL PLVNIWLLGN RLTGPIPKEF GNITTLTSLV LEANQLSGEL PLELGNLPNI QQMILSSNNF NGEIPSTFAK LTTLRDFRVS DNQLSGTIPD
201: FIQKWTKLER LFIQASGLVG PIPIAIASLV ELKDLRISDL NGPESPFPQL RNIKKMETLI LRNCNLTGDL PDYLGKITSF KFLDLSFNKL SGAIPNTYIN
301: LRDGGYIYFT GNMLNGSVPD WMVNKGYKID LSYNNFSVDP TNAVCKYNNV LSCMRNYQCP KTFNALHINC GGDEMSINGT IYESDKYDRL ESWYESRNGW
401: FSNNVGVFVD DKHVPERVTI ESNSSELNVV DFGLYTQARI SAISLTYYAL CLENGNYNVN LHFAEIMFNG NNNYQSLGRR FFDIYIQRKL EVKDFNIAKE
501: AKDVGNVVIK TFPVEIKDGK LEIRLYWAGR GTTVIPKERV YGPLISAISV DSSVNPSPRN GMSTGTLHTL VVILSIFIVF LVFGTLWKKG YLRSKSQMEK
601: DFKSLELMIA SFSLRQIKIA TNNFDSANRI GEGGFGPVYK GKLFDGTIIA VKQLSTGSKQ GNREFLNEIG MISALHHPNL VKLYGCCVEG GQLLLVYEFV
701: ENNSLARALF GPQETQLRLD WPTRRKICIG VARGLAYLHE ESRLKIVHRD IKATNVLLDK QLNPKISDFG LAKLDEEDST HISTRIAGTF GYMAPEYAMR
801: GHLTDKADVY SFGIVALEIV HGRSNKIERS KNNTFYLIDW VEVLREKNNL LELVDPRLGS EYNREEAMTM IQIAIMCTSS EPCERPSMSE VVKMLEGKKM
901: VEVEKLEEAS VHRETKRLEN MNTMKKYYEM IGQEISTSMS MIMSDRSESS ADH

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53420 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.