CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039671.1-P	Field mustard	plasma membrane	98.5	98.5
CDY45112	Canola	plasma membrane	98.5	98.5
CDY17240	Canola	cytosol	24.0	55.49
CDY32337	Canola	plasma membrane	24.75	47.37
CDY39111	Canola	cytosol	24.0	46.15
Os04t0616600-01	Rice	plasma membrane	30.5	45.69
CDY50993	Canola	cytosol	39.5	40.51
CDX81773	Canola	cytosol	39.5	40.0
CDY07897	Canola	cytosol	38.75	39.74
CDX73951	Canola	cytosol	38.5	39.49
CDY35110	Canola	cytosol	39.0	39.39
CDY40041	Canola	cytosol	38.75	39.14
CDX83948	Canola	cytosol	38.75	38.94
CDX81772	Canola	cytosol	37.75	38.32
GSMUA_AchrUn_...	Banana	cytosol	38.25	37.5
CDY50994	Canola	cytosol	32.75	35.79
CDX96813	Canola	cytosol	39.0	28.42
CDX79313	Canola	cytosol, plasma membrane, plastid	30.5	25.31
CDX98500	Canola	nucleus, plasma membrane, plastid	18.75	16.7
CDX96812	Canola	cytosol	0.5	4.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:3.30.200.20	GO:A0A078GFF1	UniProt:A0A078GFF1	EnsemblPlants:CDY24096
ProteinID:CDY24096	ProteinID:CDY24096.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00024643001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF101	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EE9432	SEG:seg

Description

BnaA06g00940DBnaA06g00940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFF1]

Coordinates

chrLK032153:+:448190..449715

Molecular Weight (calculated)

45196.1 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.162

Length

400 amino acids

Sequence
(BLAST)

001: MVCTIENAAV HGAAVMVYII MIVLIFILIY IVCKRRSLRS KTHVEGEFKS LDPMINSFSL RQIKAATNNF DTANRIGEGG FGPVHKGKLP DGTIIAVKQL
101: STGSKQGNRE FLNEIGMITA LHHPNLVKLY GCCVEGDQLL LVYEYVENNC LARALFGPQE TQLRLDWPTR RKICIGVARG LAYLHEESRI KIVHRDIKAT
201: NVLLDKEMNS KISDFGLAKL NEDDNTHIST RVAGTFGYMA PEYAMRGHLT DKVDVYSFGI VALEIVHGRS NKINQSASIY NTPYVIDWVT ILREQNNLLE
301: LVDPRLGSDY NREEAMTMLQ VVILCTIPDP SDRPLMSEVV KMLEGKKMVE LERLEEASVY KETKRLENMN TMKKYYEMIG SETSMTMTMT LTDQTTSSKH

Best Arabidopsis Sequence Match ( AT1G07650.4 )
(BLAST)

001: MRISDNNFTG PIPDFISNWT RILKLQMHGC GLDGPIPSSI SSLTSLTDLR ISDLGGKPSS FPPLKNLESI KTLILRKCKI IGPIPKYIGD LKKLKTLDLS
101: FNLLSGEIPS SFENMKKADF IYLTGNKLTG GVPNYFVERN KNVDVSFNNF TDESSIPSHD CNRVTSNLVE SFALGNKSHK GSTCFLQRMP CVHPKRYHLY
201: KLYINCGGGE VKVDKEITYQ ADDEPKGASM YVLGANKRWA LSSTGNFMDN DDDADEYTVQ NTSRLSVNAS SPSFGLYRTA RVSPLSLTYY GICLGNGNYT
301: VNLHFAEIIF TDDNTLYSLG KRLFDIYVQD QLVIKNFNIQ EAARGSGKPI IKSFLVNVTD HTLKIGLRWA GKGTTGIPIR GVYGPMISAI SVEPNFKPPV
401: YYDTKDIILK VGVPVAAATL LLFIIVGVFW KKRRDKNDID KELRGLDLQT GTFTLRQIKA ATDNFDVTRK IGEGGFGSVY KGELSEGKLI AVKQLSAKSR
501: QGNREFVNEI GMISALQHPN LVKLYGCCVE GNQLILVYEY LENNCLSRAL FGKDESSRLK LDWSTRKKIF LGIAKGLTFL HEESRIKIVH RDIKASNVLL
601: DKDLNAKISD FGLAKLNDDG NTHISTRIAG TIGYMAPEYA MRGYLTEKAD VYSFGVVALE IVSGKSNTNF RPTEDFVYLL DWAYVLQERG SLLELVDPTL
701: ASDYSEEEAM LMLNVALMCT NASPTLRPTM SQVVSLIEGK TAMQELLSDP SFSTVNPKLK ALRNHFWQNE LSRSLSFSTS GPRTASANSL VDAEEKTGLL
801: D

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.