CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039671.1-P	Field mustard	plasma membrane	98.5	98.5
CDY24096	Canola	plasma membrane	98.5	98.5
CDY17240	Canola	cytosol	23.75	54.91
CDY32337	Canola	plasma membrane	24.75	47.37
Os04t0616600-01	Rice	plasma membrane	31.0	46.44
CDY39111	Canola	cytosol	24.0	46.15
CDY50993	Canola	cytosol	39.5	40.51
CDX81773	Canola	cytosol	39.5	40.0
CDY07897	Canola	cytosol	38.75	39.74
CDX73951	Canola	cytosol	38.5	39.49
CDY35110	Canola	cytosol	39.0	39.39
CDY40041	Canola	cytosol	38.75	39.14
CDX83948	Canola	cytosol	38.75	38.94
CDX81772	Canola	cytosol	37.75	38.32
GSMUA_AchrUn_...	Banana	cytosol	38.75	37.99
CDY50994	Canola	cytosol	32.75	35.79
CDX96813	Canola	cytosol	39.0	28.42
CDX79313	Canola	cytosol, plasma membrane, plastid	30.25	25.1
CDX98500	Canola	nucleus, plasma membrane, plastid	18.75	16.7
CDX96812	Canola	cytosol	0.5	4.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:3.30.200.20	GO:A0A078I508	UniProt:A0A078I508	EnsemblPlants:CDY45112
ProteinID:CDY45112	ProteinID:CDY45112.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00081397001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF101	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EED46C	SEG:seg

Description

BnaC06g06330DBnaC06g06330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I508]

Coordinates

chrLK032614:-:822..2322

Molecular Weight (calculated)

45179.0 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.177

Length

400 amino acids

Sequence
(BLAST)

001: MVCTIVNAAV HGAAVMVYII MIVLIFILIY IVCKRRSLRS KTHVEGEFKS LDPMINSFSL RQIKAATNNF DTANRIGEGG FGPVHKGKLP DGTIIAVKQL
101: STGSKQGNRE FLNEIGMITA LHHPNLVKLY GCCVEGDQLL LVYEYVENNC LARALFGPQE TQLRLDWPTR RKICIGVARG LAYLHEESRI RIVHRDIKAT
201: NVLLDKEMNS KISDFGLAKL NEDDNTHIST RVAGTFGYMA PEYAMRGHLT DKVDVYSFGI VALEIVHGRS NKINQSASNY NTPYVIDWVT ILREQNNLLE
301: LVDPRLGSDY NREEALTMLQ VVILCTIPDP SDRPLMSEVV KMLEGKKMVE LEKLEEASEY KETKRLENMN TMKKYYEMIG SETSMTMTMT LTDQTTSSKH

Best Arabidopsis Sequence Match ( AT1G07650.3 )
(BLAST)

001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIALKSQ
101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG TTGIPIRGVY GPMISAISVE PNFKPPVYYD TKDIILKVGV
601: PVAAATLLLF IIVGVFWKKR RDKNDIDKEL RGLDLQTGTF TLRQIKAATD NFDVTRKIGE GGFGSVYKGE LSEGKLIAVK QLSAKSRQGN REFVNEIGMI
701: SALQHPNLVK LYGCCVEGNQ LILVYEYLEN NCLSRALFGK DESSRLKLDW STRKKIFLGI AKGLTFLHEE SRIKIVHRDI KASNVLLDKD LNAKISDFGL
801: AKLNDDGNTH ISTRIAGTIG YMAPEYAMRG YLTEKADVYS FGVVALEIVS GKSNTNFRPT EDFVYLLDWA YVLQERGSLL ELVDPTLASD YSEEEAMLML
901: NVALMCTNAS PTLRPTMSQV VSLIEGKTAM QELLSDPSFS TVNPKLKALR NHFWQNELSR SLSFSTSGPR TASANSLVDA EEKTGLLD

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.