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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50994 Canola cytosol 80.46 86.61
CDY35110 Canola cytosol 81.22 80.81
CDY50993 Canola cytosol 79.95 80.77
CDY40041 Canola cytosol 80.71 80.3
AT1G16670.1 Thale cress cytosol 79.19 80.0
CDX81773 Canola cytosol 79.7 79.49
CDX83948 Canola cytosol 76.9 76.13
KRH43827 Soybean cytosol 62.18 64.81
VIT_19s0027g00390.t01 Wine grape cytosol 62.44 63.9
KRH13643 Soybean cytosol 61.42 63.19
KRH44858 Soybean cytosol, nucleus, plastid 62.44 63.08
Solyc10g005630.2.1 Tomato cytosol 61.17 62.6
KRH13014 Soybean cytosol 62.18 62.5
PGSC0003DMT400029343 Potato cytosol, mitochondrion 60.41 61.66
GSMUA_Achr7P08000_001 Banana cytosol 57.87 60.16
EES17368 Sorghum cytosol 22.08 59.18
GSMUA_Achr8P33290_001 Banana cytosol 56.09 58.62
GSMUA_Achr3P23320_001 Banana cytosol, mitochondrion 58.38 58.23
GSMUA_Achr2P01370_001 Banana cytosol 56.35 57.96
Os04t0619400-01 Rice plasma membrane 54.06 57.26
Zm00001d026322_P003 Maize cytosol, plasma membrane 54.31 57.22
CDX96813 Canola cytosol 79.44 57.01
GSMUA_Achr6P30040_001 Banana mitochondrion 55.33 56.77
TraesCS5D01G071900.1 Wheat cytosol 52.03 56.32
TraesCS5B01G067800.1 Wheat cytosol 52.03 56.32
EES12875 Sorghum cytosol 53.3 56.15
TraesCS5A01G060300.2 Wheat cytosol 51.78 56.04
TraesCS2A01G462700.1 Wheat cytosol 52.54 55.5
GSMUA_Achr8P07140_001 Banana mitochondrion 55.58 55.44
Os02t0165100-01 Rice plasma membrane 54.57 55.41
Zm00001d002283_P004 Maize cytosol 52.54 55.35
GSMUA_Achr1P25690_001 Banana cytosol, plasma membrane, plastid 56.6 55.34
TraesCS2B01G484300.1 Wheat cytosol 52.28 55.23
TraesCS2D01G463100.1 Wheat cytosol 52.03 54.96
EES17374 Sorghum mitochondrion 52.54 54.91
Os08t0200500-01 Rice plasma membrane 51.27 54.74
HORVU5Hr1G015220.16 Barley cytosol 51.27 54.74
Os06t0676600-01 Rice plasma membrane 52.79 54.45
EES14682 Sorghum cytosol 50.25 54.25
Zm00001d041476_P001 Maize mitochondrion 52.03 54.23
TraesCS5B01G053800.1 Wheat mitochondrion 52.03 54.09
Zm00001d031049_P001 Maize mitochondrion 51.52 53.85
CDY39111 Canola cytosol 28.43 53.85
TraesCS5A01G048600.1 Wheat mitochondrion 51.78 53.83
TraesCS6A01G139400.2 Wheat plastid 54.57 53.62
TraesCS6B01G167900.1 Wheat plastid 54.57 53.62
EER90214 Sorghum cytosol 51.78 53.54
Zm00001d049391_P001 Maize cytosol 50.0 53.39
TraesCS6D01G129900.1 Wheat plastid 54.31 53.37
HORVU5Hr1G011640.10 Barley mitochondrion 51.02 53.03
OQU84428 Sorghum cytosol, mitochondrion, nucleus, plastid 53.55 52.88
HORVU0Hr1G015530.1 Barley plastid 53.81 52.87
TraesCS5D01G059300.1 Wheat mitochondrion 51.78 52.17
Zm00001d053818_P003 Maize mitochondrion 53.55 52.1
Zm00001d036602_P004 Maize cytosol 52.28 51.76
HORVU7Hr1G106450.1 Barley cytosol 50.25 51.56
TraesCS7A01G463500.1 Wheat cytosol 50.25 51.43
TraesCS7B01G364100.1 Wheat cytosol 50.25 51.43
TraesCS7D01G451300.1 Wheat cytosol 50.25 51.43
HORVU2Hr1G103890.8 Barley cytosol 52.03 50.87
Os12t0611100-01 Rice plasma membrane 13.2 50.49
CDY17240 Canola cytosol 21.32 48.55
KXG23971 Sorghum mitochondrion 21.07 46.89
CDX73951 Canola cytosol 45.43 45.9
CDY07897 Canola cytosol 45.43 45.9
CDY24096 Canola plasma membrane 38.32 37.75
CDY45112 Canola plasma membrane 38.32 37.75
CDY32337 Canola plasma membrane 18.02 33.97
TraesCS6B01G431300.1 Wheat plastid 51.27 30.38
CDX79313 Canola cytosol, plasma membrane, plastid 27.66 22.61
Zm00001d043649_P046 Maize plasma membrane 15.74 20.6
Zm00001d005777_P001 Maize plastid 21.32 20.14
CDX98500 Canola nucleus, plasma membrane, plastid 14.21 12.47
CDX96812 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.510.10MapMan:26.4.3.3Gene3D:3.30.200.20GO:A0A078CY85EnsemblPlants:CDX81772ProteinID:CDX81772
ProteinID:CDX81772.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00136708001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006
PANTHER:PTHR27006:SF100InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EDD555:::::
Description
BnaC08g38290D
Coordinates
chrLK031826:-:711859..713485
Molecular Weight (calculated)
44184.2 Da
IEP (calculated)
7.221
GRAVY (calculated)
-0.268
Length
394 amino acids
Sequence
(BLAST)
001: MGCFWFSRHK SGVEPSEADG EVSLTEKVKI YKYKEIRQAT DDFNALNKIG EGGFGSVYKG HLKDGKVAAI KVLSAESRQG VKEFLTEINV ISEIQHENLV
101: KLYGCCVEGN HRILVYNYLD NNSLDKTLLA GGYTRSGIQF DWSTRANICV GVAKGLAFLH EEVQPPIIHR DIKASNILLD RDLSPKISDF GLARLMPPNM
201: THVSTCVAGT IGYLAPEYAS RGQLTRKADV YSFGVLLMEI VSGRSNKNTL SPTEYQYLLE RAWELYERNE LVDLVDIALG GVFDAEEACR YLRIGLLCTQ
301: DGPQLRPTMS TVVKLVTEEK DIDTKKITKP GLISDFMDMK VREPVETKTE EVNRCNYTNP SSYNASPIVT TQMVTHQGLH QLMRFIRSAL PIRK
Best Arabidopsis Sequence Match ( AT1G07650.1 )
(BLAST)
0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIALKSQ
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.