Factsheet for GSMUA_Achr6P30040_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P33290_001	Banana	cytosol	65.1	66.31
GSMUA_Achr7P08000_001	Banana	cytosol	64.84	65.7
VIT_19s0027g00390.t01	Wine grape	cytosol	65.1	64.94
KRH43827	Soybean	cytosol	62.76	63.76
GSMUA_Achr2P01370_001	Banana	cytosol	63.28	63.45
GSMUA_Achr3P23320_001	Banana	cytosol, mitochondrion	65.1	63.29
KRH13643	Soybean	cytosol	62.24	62.4
GSMUA_Achr1P25690_001	Banana	cytosol, plasma membrane, plastid	65.36	62.28
Solyc10g005630.2.1	Tomato	cytosol	62.24	62.08
PGSC0003DMT400029343	Potato	cytosol, mitochondrion	61.72	61.4
VIT_19s0014g01530.t01	Wine grape	mitochondrion	60.68	60.52
KRH44858	Soybean	cytosol, nucleus, plastid	60.94	60.0
KRH13014	Soybean	cytosol	60.94	59.69
Solyc07g062620.2.1	Tomato	cytosol	59.38	59.22
EES17368	Sorghum	cytosol	22.66	59.18
GSMUA_Achr8P07140_001	Banana	mitochondrion	60.68	58.99
PGSC0003DMT400032254	Potato	cytosol	59.11	58.96
CDY35110	Canola	cytosol	60.68	58.84
CDY40041	Canola	cytosol	60.68	58.84
Bra026032.1-P	Field mustard	cytosol	60.68	58.84
TraesCS5A01G048600.1	Wheat	mitochondrion	57.55	58.31
AT1G16670.1	Thale cress	cytosol	59.11	58.21
HORVU5Hr1G011640.10	Barley	mitochondrion	57.03	57.78
TraesCS5B01G053800.1	Wheat	mitochondrion	57.03	57.78
Zm00001d041476_P001	Maize	mitochondrion	56.77	57.67
Bra026710.1-P	Field mustard	cytosol	58.33	57.44
CDY50993	Canola	cytosol	58.33	57.44
EES17374	Sorghum	mitochondrion	56.25	57.29
CDX81773	Canola	cytosol	58.07	56.46
TraesCS5D01G059300.1	Wheat	mitochondrion	57.29	56.27
Bra026711.1-P	Field mustard	cytosol	57.81	56.2
CDX83948	Canola	cytosol	58.07	56.03
Zm00001d031049_P001	Maize	mitochondrion	54.95	55.97
KRH26219	Soybean	cytosol	59.64	55.85
Os12t0611100-01	Rice	plasma membrane	14.84	55.34
CDX81772	Canola	cytosol	56.77	55.33
CDY50994	Canola	cytosol	50.78	53.28
KRH55104	Soybean	plasma membrane	59.38	51.01
GSMUA_Achr1P17640_001	Banana	cytosol	46.35	47.09
KXG23971	Sorghum	mitochondrion	21.61	46.89
GSMUA_Achr11P...	Banana	cytosol	46.35	46.84
GSMUA_Achr3P14290_001	Banana	cytosol	45.83	46.56
GSMUA_AchrUn_...	Banana	mitochondrion	44.53	44.76
CDX96813	Canola	cytosol	58.33	40.8
GSMUA_Achr10P...	Banana	plasma membrane	36.2	39.15
GSMUA_AchrUn_...	Banana	cytosol	40.62	38.24
Bra016636.1-P	Field mustard	cytosol	57.55	34.97
Zm00001d043649_P046	Maize	plasma membrane	18.75	23.92
Zm00001d005777_P001	Maize	plastid	23.18	21.34

Protein Annotations

Gene3D:1.10.510.10	MapMan:26.4.3.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr6G30040_001	EnsemblPlants:GSMUA_Achr6P30040_001	EnsemblPlants:GSMUA_Achr6T30040_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TBE9
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF100	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000296AFDA	:	:	:	:	:

Description

protein kinase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G30040_001]

Coordinates

chr6:+:30156782..30158473

Molecular Weight (calculated)

42299.8 Da

IEP (calculated)

7.818

GRAVY (calculated)

-0.132

Length

384 amino acids

Sequence
(BLAST)

001: MTCLSFLFKR RNTSRQQAIT NFGDIPGMEY MIIYSYKELS SATEDFSPGN KIGEGGFGSV YKGKLKDGRV VAIKVLSSKS KQGVREFLNE IKVVSSIAHE
101: NLVRLYGFCV EGDNRILVYD YLENNSLAHT LLGGGHSNIQ FSWETRSRIC IGVARGLAFL HEEVRPRIVH RDIKASNVLL DSHLTPKISD FGLAKLLPPN
201: TTHVSTRVAG TIGYLAPEYA IHGQLTRRAD TYSFGVLLLE IVTGRCNTNT RLPCEDQFLL ERTWGLYERG EVLSIVDASL GDDFDAEEAC RFIKIALVCT
301: QDAPRLRPSM PAVVRMLRGE SNVSMEITKP GLITDLMDLK VRRQRDAGDP DASPVVFTTL HGSPSSSSGN ATAIMSSSTA AELA

Best Arabidopsis Sequence Match ( AT1G16670.1 )
(BLAST)

001: MGCSWLSCHR REATEVDGEI AAIDNVKIYK YREIRQATDD FSAENKIGEG GFGSVYKGCL KDGKLAAIKV LSAESRQGVK EFLTEINVIS EIQHENLVKL
101: YGCCVEGNHR ILVYNFLENN SLDKTLLAGG YTRSGIQFDW SSRANICVGV AKGLAFLHEE VRPHIIHRDI KASNILLDKY LSPKISDFGL ARLMPPNMTH
201: VSTRVAGTIG YLAPEYAVRG QLTRKADIYS FGVLLMEIVS GRSNKNTRLP TEYQYLLERA WELYERNELV DLVDSGLNGV FDAEEACRYL KIGLLCTQDS
301: PKLRPSMSTV VRLLTGEKDI DYKKISRPGL ISDFMDLKVR GPVATKTEQV NRQNYTNPSS SSNGSSRDHS NAYSSGASSA NAGNTFSSTI

Arabidopsis Description

CRPK1Cold-responsive protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93YN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.