Factsheet for GSMUA_Achr10P23450_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088826	Potato	cytosol	58.59	66.24
Solyc07g006940.1.1	Tomato	plasma membrane	61.13	57.87
Os04t0658700-00	Rice	plasma membrane	63.1	53.98
EES11585	Sorghum	plasma membrane	60.85	52.55
Zm00001d001993_P001	Maize	plasma membrane	61.97	51.89
TraesCS2A01G500700.1	Wheat	plasma membrane	61.41	51.42
TraesCS2B01G528600.1	Wheat	plasma membrane	60.85	50.94
HORVU2Hr1G111460.2	Barley	plasma membrane	61.13	50.94
KRH02726	Soybean	golgi, mitochondrion, plasma membrane	61.97	50.93
TraesCS2D01G500900.1	Wheat	plasma membrane	61.13	49.89
KRH12373	Soybean	plasma membrane	60.56	49.54
KRH37374	Soybean	plasma membrane, plastid, vacuole	59.44	48.73
VIT_11s0052g00700.t01	Wine grape	plasma membrane	61.13	47.8
GSMUA_Achr1P17640_001	Banana	cytosol	42.25	39.68
GSMUA_Achr8P33290_001	Banana	cytosol	41.97	39.52
GSMUA_Achr7P08000_001	Banana	cytosol	38.87	36.41
GSMUA_Achr3P14290_001	Banana	cytosol	38.59	36.24
GSMUA_Achr6P30040_001	Banana	mitochondrion	39.15	36.2
GSMUA_Achr3P23320_001	Banana	cytosol, mitochondrion	40.0	35.95
GSMUA_Achr11P...	Banana	cytosol	38.31	35.79
GSMUA_AchrUn_...	Banana	mitochondrion	38.03	35.34
GSMUA_Achr2P01370_001	Banana	cytosol	37.18	34.46
GSMUA_AchrUn_...	Banana	cytosol	39.44	34.31
GSMUA_Achr1P25690_001	Banana	cytosol, plasma membrane, plastid	38.87	34.24
GSMUA_Achr8P07140_001	Banana	mitochondrion	37.18	33.42

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G23450_001
EnsemblPlants:GSMUA_Achr10P23450_001	EnsemblPlants:GSMUA_Achr10T23450_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RKS0	PFAM:PF07714
PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF21	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000295170D	SEG:seg	:	:	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Source:GMGC_GENE;Acc:GSMUA_Achr10G23450_001]

Coordinates

chr10:+:28201343..28202908

Molecular Weight (calculated)

39421.0 Da

IEP (calculated)

8.469

GRAVY (calculated)

-0.084

Length

355 amino acids

Sequence
(BLAST)

001: MSFGVIAILI VVLVLLALCW KSRKPKPTWK TPNSTKSPAG NNSLYEQNKN HILSLLVSNQ LGGGGFGPVY KGTLDDGRII AVKQLSVGKS QQGEREFLAE
101: VRMLTSIQHK NLVHLIGCCS EGAERLLVYE CMTNGSLNSI FSGKSETSLN WKTRFQIIIG VARGLQYLHE DSNLRIVHRD IKASNILLDD KFQPKISDFG
201: LARFFPEDEA YLSTRFAGTL GYSAPEYALR GELSEKADIY SFGVLVLEII SCRKNTDLSL PNEMQYLPEY VNPCLHRSKM TDLVDSRLLE EGALEKDVLQ
301: VCHVALLCLQ PHPSLRPPMS EIVAMLTCRT PPSSAPVRPT ILERKSRFGI GISPS

Best Arabidopsis Sequence Match ( AT1G56120.1 )
(BLAST)

0001: MVRAQNRTRP TTHPDDARAL NSIFAAWKIR APREWNISGE LCSGVAIDAS VLDSNHAYNP LIKCDCSFQN STICRINNIK VYAIDVVGPI PPELWTLTYL
0101: TNLNLGQNYL TGSLSPAIGN LTRMQWMTFG INALSGPIPK EIGLLTDLRL LGISSNNFSG SLPAEIGSCT KLQQMYIDSS GLSGGIPLSF ANFVELEVAW
0201: IMDVELTGRI PDFIGFWTKL TTLRILGTGL SGPIPSSFSN LIALTELRLG DISNGSSSLD FIKDMKSLSV LVLRNNNLTG TIPSTIGGYT SLQQVDLSFN
0301: KLHGPIPASL FNLSRLTHLF LGNNTLNGSL PTLKGQSLSN LDVSYNDLSG SLPSWVSLPD LKLNLVANNF TLEGLDNRVL SGLHCLQKNF PCNRGEGICK
0401: CNKKIPSQIM FSMLNVQTYG QGSNVLLEKN CFKTFAIDWC LDYNFSINCG GPEIRSVSGA LFEKEDADLG PASFVVSAAK RWAASSVGNF AGSSNNIYIA
0501: TSLAQFINTM DSELFQSARL SASSLRYYGL GLENGGYTVT LQFAEVQIEG SNSWKGIGRR RFNIYVQGRL VEKDFDIRRT AGGSSVRAVQ REYKTNVSEN
0601: HLEVHLFWAG KGTCCIPIQG AYGPLIAAVS ATPDFTPTVA NRPPSKGKSR TGTIVGVIVG VGLLSIFAGV VILVIRKRRK PYTDDEEILS MDVKPYTFTY
0701: SELKNATQDF DLSNKLGEGG FGAVYKGNLN DGREVAVKQL SIGSRQGKGQ FVAEIIAISS VLHRNLVKLY GCCFEGDHRL LVYEYLPNGS LDQALFGDKS
0801: LHLDWSTRYE ICLGVARGLV YLHEEASVRI IHRDVKASNI LLDSELVPKV SDFGLAKLYD DKKTHISTRV AGTIGYLAPE YAMRGHLTEK TDVYAFGVVA
0901: LELVSGRKNS DENLEEGKKY LLEWAWNLHE KNRDVELIDD ELSEYNMEEV KRMIGIALLC TQSSYALRPP MSRVVAMLSG DAEVNDATSK PGYLTDCTFD
1001: DTTSSSFSNF QTKDTSFSTS FIAPGPEMPL RDGESKPMVG FKIKEGR

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.