CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi

Predictor Summary:

plastid 1
plasma membrane 2
nucleus 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088826	Potato	cytosol	54.4	74.84
KRH12373	Soybean	plasma membrane	71.53	71.2
KRH37374	Soybean	plasma membrane, plastid, vacuole	70.37	70.21
Solyc07g006940.1.1	Tomato	plasma membrane	59.03	68.0
GSMUA_Achr10P...	Banana	plasma membrane	50.93	61.97
VIT_11s0052g00700.t01	Wine grape	plasma membrane	64.58	61.45
EES11585	Sorghum	plasma membrane	54.86	57.66
Os04t0658700-00	Rice	plasma membrane	54.4	56.63
Zm00001d001993_P001	Maize	plasma membrane	55.32	56.37
TraesCS2A01G500700.1	Wheat	plasma membrane	53.94	54.95
HORVU2Hr1G111460.2	Barley	plasma membrane	54.17	54.93
TraesCS2B01G528600.1	Wheat	plasma membrane	53.47	54.48
TraesCS2D01G500900.1	Wheat	plasma membrane	53.47	53.1
KRH10841	Soybean	plastid	36.81	44.17
KRH50012	Soybean	cytosol	37.27	43.87
KRH20479	Soybean	cytosol	37.04	43.6
KRH21475	Soybean	cytosol, nucleus, plastid	36.57	41.91
KRH43827	Soybean	cytosol	35.42	40.48
KRH13643	Soybean	cytosol	35.65	40.21
KRH44858	Soybean	cytosol, nucleus, plastid	36.11	40.0
KRH13014	Soybean	cytosol	36.11	39.8
KRH49354	Soybean	cytosol	34.49	39.21
KRH00205	Soybean	cytosol	34.49	39.21
KRH32469	Soybean	cytosol	33.33	38.1
KRH26219	Soybean	cytosol	34.95	36.83
KRH19857	Soybean	plastid	32.41	34.31
KRH55104	Soybean	plasma membrane	34.95	33.78
KRG95977	Soybean	mitochondrion, plastid	32.41	32.18
KRH67683	Soybean	cytosol	31.02	29.52
KRH71580	Soybean	plasma membrane	13.19	28.93

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100812302	Gene3D:3.30.200.20	MapMan:50.2.7	EMBL:ACUP02010320	EnsemblPlantsGene:GLYMA_17G055900
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K7MK32	EnsemblPlants:KRH02726	ProteinID:KRH02726
ProteinID:KRH02726.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF21	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000296D495	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:+:4250230..4254007

Molecular Weight (calculated)

49577.8 Da

IEP (calculated)

9.135

GRAVY (calculated)

-0.125

Length

432 amino acids

Sequence
(BLAST)

001: MHASVPKMPR RILPEKPPIP SHHDPGVFFF LGGIVVLVIL LILVFIFWRR IKRPAKVMEN TVLTSQQHGK YIEPSEVMKM IVPNIKQPGP MEFISGNLRT
101: ISYFDFRTLR RATKNFHPRN LLGSGGFGPV YQGKLADGRL IAVKTLSLDK SQQGEKEFLA EVRMITSIQH KNLVRLIGCC TDGPQRILVY EYMKNRSLDL
201: IIYGKSDQFL NWSTRFQIIL GVARGLQYLH EDSHLRIVHR DIKASNILLD EKFQPRIGDF GLARFFPEDQ AYLSTQFAGT LGYTAPEYAI RGELSEKADI
301: YSFGVLVLEI ISCRKNTDLT LASEKQYLPE YAWKLYEKSM LMEIVDPKLQ EQGIEEKDVM QAFHVALLCL QPHADLRPAM SEIVAMLTFK VEMVTAPMRP
401: IFVDRRRVMD DEHHSWETIY EAFTTAVASR PT

Best Arabidopsis Sequence Match ( AT1G56130.1 )
(BLAST)

001: MQWMTFGINA LSGPVPKEIG LLTDLRLLGI SSNNFSGSIP DEIGRCTKLQ QMYIDSSGLS GRIPLSFANL VQLEQAWIAD LEVTDQIPDF IGDWTKLTTL
101: RIIGTGLSGP IPSSFSNLTS LTELRLGDIS SGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGEHSSLR QVDLSFNKLH GPIPASLFNL SQLTHLFLGN
201: NTLNGSFPTQ KTQSLRNVDV SYNDLSGSLP SWVSLPSLKL NLVANNFTLE GLDNRVLPGL NCLQKNFPCN RGKGIYSDFS INCGGPEKRS VTGALFERED
301: EDFGPASFFV SAGQRWAASS VGLFAGSSNN IYIATSQSQF VNTLDSELFQ SARLSASSVR YYGLGLENGG YTVTLQFAEI QILGSTSTTW KGLGRRRFDI
401: YVQGRLVEKD FDVRRTAGDS TVRAVQRVYK ANVSENHLEV HLFWAGKGTC CIPIQGAYGP LISAVSATPD FTPTVANKPP SKGKNRTGTI VGVIVGVGLL
501: SILAGVVMFT IRKRRKRYTD DEELLGMDVK PYIFTYSELK SATQDFDPSN KLGEGGFGPV YKGNLNDGRV VAVKLLSVGS RQGKGQFVAE IVAISSVLHR
601: NLVKLYGCCF EGEHRMLVYE YLPNGSLDQA LFGDKTLHLD WSTRYEICLG VARGLVYLHE EASVRIVHRD VKASNILLDS RLVPQISDFG LAKLYDDKKT
701: HISTRVAGTI GYLAPEYAMR GHLTEKTDVY AFGVVALELV SGRPNSDENL EEEKKYLLEW AWNLHEKSRD IELIDDKLTD FNMEEAKRMI GIALLCTQTS
801: HALRPPMSRV VAMLSGDVEI GDVTSKPGYV SDWRFDDTTG SSLSGFQIKD TTGYSMSLVA PGSEISPRDS DFKPMLGSKI NEGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.