Factsheet for Solyc07g006940.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088826	Potato	cytosol	80.8	96.5
GSMUA_Achr10P...	Banana	plasma membrane	57.87	61.13
KRH02726	Soybean	golgi, mitochondrion, plasma membrane	68.0	59.03
KRH12373	Soybean	plasma membrane	66.93	57.83
KRH37374	Soybean	plasma membrane, plastid, vacuole	66.67	57.74
VIT_11s0052g00700.t01	Wine grape	plasma membrane	68.8	56.83
Os04t0658700-00	Rice	plasma membrane	61.87	55.9
EES11585	Sorghum	plasma membrane	60.0	54.74
TraesCS2A01G500700.1	Wheat	plasma membrane	60.0	53.07
TraesCS2B01G528600.1	Wheat	plasma membrane	59.73	52.83
Zm00001d001993_P001	Maize	plasma membrane	59.47	52.59
HORVU2Hr1G111460.2	Barley	plasma membrane	59.73	52.58
TraesCS2D01G500900.1	Wheat	plasma membrane	59.73	51.49
Solyc09g014470.1.1	Tomato	plastid	25.6	45.93
Solyc02g078530.2.1	Tomato	cytosol	38.67	39.62
Solyc03g006500.2.1	Tomato	plastid	38.67	39.19
Solyc10g076760.1.1	Tomato	cytosol	38.4	38.3
Solyc07g062620.2.1	Tomato	cytosol	39.2	38.18
Solyc10g005630.2.1	Tomato	cytosol	38.67	37.66
Solyc10g084110.1.1	Tomato	cytosol	36.8	35.94
Solyc09g007730.2.1	Tomato	cytosol	35.73	35.08
Solyc09g014460.1.1	Tomato	plasma membrane	12.53	24.74

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
UniProt:K4CBG5	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF21	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc07g006940.1	EnsemblPlants:Solyc07g006940.1.1	TMHMM:TMhelix	UniParc:UPI000276C9C2	SEG:seg	:

Description

No Description!

Coordinates

chr7:+:1773524..1775074

Molecular Weight (calculated)

42385.1 Da

IEP (calculated)

8.438

GRAVY (calculated)

0.050

Length

375 amino acids

Sequence
(BLAST)

001: MQPLSALFFF LGTLLVLLLL IFILCKFFKP GKLTALITST FKPLPEMSNA VSVHLHTISY FNFHTLEKAT KNFHSDNLLG CGGFGPVFLG KLGDGQLVAV
101: KKLSVDKSQQ GDREFLAEVR MITSIQHKNL VRLLGCCSEG DQRLLVYEYM KNRSLDQILY GKSKIFLDWK TRYQIILGIA RGLQYLHEDS HIRIVHRDIK
201: ASNILLDDKF QPRIGDFGLA RFFPEDQAYL STAFAGTLGY TAPEYALRGE LTEKADIYSY GVVVLEIINS RKNTDLSLPS EMQYLPDYAW KLYERSRLID
301: LVDPKMLENG VAEKDVMQTI HVAFLCLQPH ANLRPPMSEI VAMLVTKAGT LITPPMPPPF LDPELRIGRT ITVHG

Best Arabidopsis Sequence Match ( AT1G56120.3 )
(BLAST)

001: MQWMTFGINA LSGPIPKEIG LLTDLRLLGI SSNNFSGSLP AEIGSCTKLQ QMYIDSSGLS GGIPLSFANF VELEVAWIMD VELTGRIPDF IGFWTKLTTL
101: RILGTGLSGP IPSSFSNLIA LTELRLGDIS NGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGGYTSLQ QVDLSFNKLH GPIPASLFNL SRLTHLFLGN
201: NTLNGSLPTL KGQSLSNLDV SYNDLSGSLP SWVSLPDLKL NLVANNFTLE GLDNRVLSGL HCLQKNFPCN RGEGIYYNFS INCGGPEIRS VSGALFEKED
301: ADLGPASFVV SAAKRWAASS VGNFAGSSNN IYIATSLAQF INTMDSELFQ SARLSASSLR YYGLGLENGG YTVTLQFAEV QIEGSNSWKG IGRRRFNIYV
401: QGRLVEKDFD IRRTAGGSSV RAVQREYKTN VSENHLEVHL FWAGKGTCCI PIQGAYGPLI AAVSATPDFT PTVANRPPSK GKSRTGTIVG VIVGVGLLSI
501: FAGVVILVIR KRRKPYTDDE EILSMDVKPY TFTYSELKNA TQDFDLSNKL GEGGFGAVYK GNLNDGREVA VKQLSIGSRQ GKGQFVAEII AISSVLHRNL
601: VKLYGCCFEG DHRLLVYEYL PNGSLDQALF GDKSLHLDWS TRYEICLGVA RGLVYLHEEA SVRIIHRDVK ASNILLDSEL VPKVSDFGLA KLYDDKKTHI
701: STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RKNSDENLEE GKKYLLEWAW NLHEKNRDVE LIDDELSEYN MEEVKRMIGI ALLCTQSSYA
801: LRPPMSRVVA MLSGDAEVND ATSKPGYLTD CTFDDTTSSS FSNFQTKDTS FSTSFIAPGP EMPLRDGESK PMVGFKIKEG R

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.