Factsheet for VIT_12s0055g00610.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00520.t01	Wine grape	plasma membrane	66.67	30.72
VIT_13s0019g04160.t01	Wine grape	cytosol	45.1	23.96
VIT_06s0004g06430.t01	Wine grape	cytosol	50.98	20.97
GSMUA_AchrUn_...	Banana	cytosol	53.59	20.1
VIT_08s0007g02150.t01	Wine grape	cytosol	49.67	20.0
VIT_19s0014g01530.t01	Wine grape	mitochondrion	50.33	20.0
VIT_19s0014g00510.t01	Wine grape	plasma membrane	50.98	19.75
VIT_19s0027g00390.t01	Wine grape	cytosol	49.67	19.74
VIT_08s0040g01930.t01	Wine grape	cytosol, plastid	48.37	18.55
VIT_00s0370g00010.t01	Wine grape	cytosol	50.98	17.69
VIT_11s0052g00700.t01	Wine grape	plasma membrane	47.06	15.86
Os04t0616600-01	Rice	plasma membrane	23.53	13.48
VIT_10s0092g00570.t01	Wine grape	mitochondrion, plasma membrane	69.28	11.36
VIT_19s0014g00480.t01	Wine grape	cytosol	17.65	10.98
VIT_12s0055g00600.t01	Wine grape	mitochondrion, plasma membrane, plastid	0.0	0.0
VIT_12s0055g00640.t01	Wine grape	cytosol, mitochondrion, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CBI20018	ProteinID:CBI20018.3	UniProt:D7STA4
EMBL:FN595228	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004713
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF95	InterPro:Prot_kinase_dom
SMART:SM00219	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_cat_dom	UniParc:UPI0001BE1970	ArrayExpress:VIT_12s0055g00610
EnsemblPlantsGene:VIT_12s0055g00610	EnsemblPlants:VIT_12s0055g00610.t01	:	:	:	:

Description

No Description!

Coordinates

chr12:-:13761602..13762567

Molecular Weight (calculated)

17043.3 Da

IEP (calculated)

8.038

GRAVY (calculated)

-0.245

Length

153 amino acids

Sequence
(BLAST)

001: MYFYQKSEIK GMLLGMDARP YTFSYAELRN ATEDFSPSNK LGEGGFGPVY KGTLSDGRVV AVKQLSVSSH QGKNPFVTEI ATISAVQHRN LVKLYGCCIE
101: GVNRSLVYEY LVNKSLDQAL FGKRNGSLDL DWPTRYDICL GVARGLAYLH EES

Best Arabidopsis Sequence Match ( AT1G56130.1 )
(BLAST)

001: MQWMTFGINA LSGPVPKEIG LLTDLRLLGI SSNNFSGSIP DEIGRCTKLQ QMYIDSSGLS GRIPLSFANL VQLEQAWIAD LEVTDQIPDF IGDWTKLTTL
101: RIIGTGLSGP IPSSFSNLTS LTELRLGDIS SGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGEHSSLR QVDLSFNKLH GPIPASLFNL SQLTHLFLGN
201: NTLNGSFPTQ KTQSLRNVDV SYNDLSGSLP SWVSLPSLKL NLVANNFTLE GLDNRVLPGL NCLQKNFPCN RGKGIYSDFS INCGGPEKRS VTGALFERED
301: EDFGPASFFV SAGQRWAASS VGLFAGSSNN IYIATSQSQF VNTLDSELFQ SARLSASSVR YYGLGLENGG YTVTLQFAEI QILGSTSTTW KGLGRRRFDI
401: YVQGRLVEKD FDVRRTAGDS TVRAVQRVYK ANVSENHLEV HLFWAGKGTC CIPIQGAYGP LISAVSATPD FTPTVANKPP SKGKNRTGTI VGVIVGVGLL
501: SILAGVVMFT IRKRRKRYTD DEELLGMDVK PYIFTYSELK SATQDFDPSN KLGEGGFGPV YKGNLNDGRV VAVKLLSVGS RQGKGQFVAE IVAISSVLHR
601: NLVKLYGCCF EGEHRMLVYE YLPNGSLDQA LFGDKTLHLD WSTRYEICLG VARGLVYLHE EASVRIVHRD VKASNILLDS RLVPQISDFG LAKLYDDKKT
701: HISTRVAGTI GYLAPEYAMR GHLTEKTDVY AFGVVALELV SGRPNSDENL EEEKKYLLEW AWNLHEKSRD IELIDDKLTD FNMEEAKRMI GIALLCTQTS
801: HALRPPMSRV VAMLSGDVEI GDVTSKPGYV SDWRFDDTTG SSLSGFQIKD TTGYSMSLVA PGSEISPRDS DFKPMLGSKI NEGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.