Factsheet for VIT_08s0040g01930.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 4
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027119	Potato	cytosol	53.88	61.96
Solyc09g007730.2.1	Tomato	cytosol	57.64	60.21
Solyc10g084110.1.1	Tomato	cytosol	57.39	59.64
PGSC0003DMT400053890	Potato	cytosol	56.64	59.16
KRH32469	Soybean	cytosol	55.39	58.47
VIT_13s0019g04160.t01	Wine grape	cytosol	41.85	57.99
VIT_12s0055g00600.t01	Wine grape	mitochondrion, plasma membrane, plastid	8.27	56.9
KRH19857	Soybean	plastid	54.14	52.94
VIT_19s0014g01530.t01	Wine grape	mitochondrion	48.12	49.87
VIT_19s0027g00390.t01	Wine grape	cytosol	47.62	49.35
KRG95977	Soybean	mitochondrion, plastid	53.13	48.74
VIT_12s0055g00610.t01	Wine grape	cytosol	18.55	48.37
KRH67683	Soybean	cytosol	51.13	44.93
VIT_12s0055g00640.t01	Wine grape	cytosol, mitochondrion, plastid	15.79	44.68
VIT_06s0004g06430.t01	Wine grape	cytosol	41.6	44.62
VIT_10s0092g00520.t01	Wine grape	plasma membrane	37.09	44.58
VIT_08s0007g02150.t01	Wine grape	cytosol	41.35	43.42
VIT_00s0370g00010.t01	Wine grape	cytosol	41.6	37.64
VIT_19s0014g00480.t01	Wine grape	cytosol	22.06	35.77
VIT_11s0052g00700.t01	Wine grape	plasma membrane	37.34	32.82
VIT_19s0014g00510.t01	Wine grape	plasma membrane	27.82	28.1
VIT_10s0092g00570.t01	Wine grape	mitochondrion, plasma membrane	41.35	17.68

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100255008	wikigene:100255008	Gene3D:3.30.200.20	MapMan:50.2.7	UniProt:A5B9X0
EMBL:AM451749	ProteinID:CAN69887	ProteinID:CAN69887.1	ProteinID:CCB57069	ProteinID:CCB57069.1	EMBL:FN596008
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100255008	wikigene:LOC100255008	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF49
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015205C5
ArrayExpress:VIT_08s0040g01930	EnsemblPlantsGene:VIT_08s0040g01930	EnsemblPlants:VIT_08s0040g01930.t01	unigene:Vvi.15903	RefSeq:XP_002281059	RefSeq:XP_002281059.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:13018070..13020424

Molecular Weight (calculated)

43926.1 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.234

Length

399 amino acids

Sequence
(BLAST)

001: MKFSFSFSNC FSPSSPPEVD RSSSSGQETG GNTSEKFQVF SYKELKIATD SFHPSNKIGE GGFGSVYKGQ LRDGTTVAVK VLSVEIESMR GEREFVSELS
101: ALTDIKHENL VTLQGCCVEG ASRFLVYDYM ENNSLAQTLL GAKQNRMEFG WEARRGISLG VGRGLAYLHE EVQPHIIHRD IKAANILLDQ NLAPKISDFG
201: LSKLFVDSRS HISTRVAGTL GYLAPEYALS GRLTRKSDVY SFGVLLLEII SGHSVVEYDL EHGEHYLVEK AWEMYTDNKL LQLVDPTLKD FPEEEAIQFL
301: KVGLLCVQEI SGLRPRMSAA VKMLTNEINV NDVHISQPGL LSDLTAVKIG HRRSFPTISS KASTSTSTQS ANTNPSLTGS SGPLNMDAVL FDVKSESHR

Best Arabidopsis Sequence Match ( AT1G16670.1 )
(BLAST)

001: MGCSWLSCHR REATEVDGEI AAIDNVKIYK YREIRQATDD FSAENKIGEG GFGSVYKGCL KDGKLAAIKV LSAESRQGVK EFLTEINVIS EIQHENLVKL
101: YGCCVEGNHR ILVYNFLENN SLDKTLLAGG YTRSGIQFDW SSRANICVGV AKGLAFLHEE VRPHIIHRDI KASNILLDKY LSPKISDFGL ARLMPPNMTH
201: VSTRVAGTIG YLAPEYAVRG QLTRKADIYS FGVLLMEIVS GRSNKNTRLP TEYQYLLERA WELYERNELV DLVDSGLNGV FDAEEACRYL KIGLLCTQDS
301: PKLRPSMSTV VRLLTGEKDI DYKKISRPGL ISDFMDLKVR GPVATKTEQV NRQNYTNPSS SSNGSSRDHS NAYSSGASSA NAGNTFSSTI

Arabidopsis Description

CRPK1Cold-responsive protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93YN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.