Factsheet for PGSC0003DMT400027119

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g084110.1.1	Tomato	cytosol	94.52	85.42
PGSC0003DMT400053890	Potato	cytosol	74.64	67.8
VIT_08s0040g01930.t01	Wine grape	cytosol, plastid	61.96	53.88
KRH32469	Soybean	cytosol	54.47	50.0
KRH19857	Soybean	plastid	54.76	46.57
PGSC0003DMT400029343	Potato	cytosol, mitochondrion	49.28	44.3
PGSC0003DMT400033378	Potato	plastid	45.82	42.97
PGSC0003DMT400088826	Potato	cytosol	38.33	42.36
PGSC0003DMT400032254	Potato	cytosol	46.97	42.34
KRG95977	Soybean	mitochondrion, plastid	53.03	42.3
PGSC0003DMT400057792	Potato	cytosol	44.09	41.8
KRH67683	Soybean	cytosol	53.03	40.53
PGSC0003DMT400049201	Potato	cytosol	43.52	40.16
PGSC0003DMT400021884	Potato	cytosol, mitochondrion, nucleus, plasma membrane	42.65	36.72

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1AP76	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400010460	PGSC:PGSC0003DMG400010460
EnsemblPlants:PGSC0003DMT400027119	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF102	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295E2C4	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400010460]

Coordinates

chr10:-:54973251..54975552

Molecular Weight (calculated)

39016.3 Da

IEP (calculated)

7.250

GRAVY (calculated)

-0.092

Length

347 amino acids

Sequence
(BLAST)

001: MEINQIIPYE TGGKRVQKFS IFSYKELKVA THGFRASNRI GEGGFGSVYK GRLEDGSFVA VKVLLIELES MRGEREFISE IAALSNIRHE NLVTLRGYCV
101: DGTKRLLVYD YMENNCLSQT LLGEEQNRSK FTWELRREIS KGIAKGLSYL HEEVNPHVVH RDIKASNIVL DHKFTPKIAD FGLSRLFSKN ISHITTRVAG
201: TLGYLSPEYA ISGHLTRKSD VYSFGVLLLE IISGCPVIAF DIERGEHFLV KKAWEMYNSG KLLELVDPML NGEFCGDEAV RFLKIGLLCV QEIASLRPKM
301: SAIFNMLNSA NYMELDDINI TQPGILADLG DVKIGQKQSS NSFCPML

Best Arabidopsis Sequence Match ( AT1G16670.1 )
(BLAST)

001: MGCSWLSCHR REATEVDGEI AAIDNVKIYK YREIRQATDD FSAENKIGEG GFGSVYKGCL KDGKLAAIKV LSAESRQGVK EFLTEINVIS EIQHENLVKL
101: YGCCVEGNHR ILVYNFLENN SLDKTLLAGG YTRSGIQFDW SSRANICVGV AKGLAFLHEE VRPHIIHRDI KASNILLDKY LSPKISDFGL ARLMPPNMTH
201: VSTRVAGTIG YLAPEYAVRG QLTRKADIYS FGVLLMEIVS GRSNKNTRLP TEYQYLLERA WELYERNELV DLVDSGLNGV FDAEEACRYL KIGLLCTQDS
301: PKLRPSMSTV VRLLTGEKDI DYKKISRPGL ISDFMDLKVR GPVATKTEQV NRQNYTNPSS SSNGSSRDHS NAYSSGASSA NAGNTFSSTI

Arabidopsis Description

CRPK1Cold-responsive protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93YN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.