Factsheet for PGSC0003DMT400053890

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g007730.2.1	Tomato	cytosol	97.12	97.12
PGSC0003DMT400027119	Potato	cytosol	67.8	74.64
VIT_08s0040g01930.t01	Wine grape	cytosol, plastid	59.16	56.64
KRH32469	Soybean	cytosol	54.19	54.76
KRH19857	Soybean	plastid	53.93	50.49
PGSC0003DMT400029343	Potato	cytosol, mitochondrion	46.86	46.37
PGSC0003DMT400032254	Potato	cytosol	46.6	46.23
KRG95977	Soybean	mitochondrion, plastid	52.36	45.98
PGSC0003DMT400049201	Potato	cytosol	43.72	44.41
PGSC0003DMT400057792	Potato	cytosol	41.62	43.44
PGSC0003DMT400033378	Potato	plastid	41.62	42.97
KRH67683	Soybean	cytosol	51.05	42.95
PGSC0003DMT400088826	Potato	cytosol	34.82	42.36
PGSC0003DMT400021884	Potato	cytosol, mitochondrion, nucleus, plasma membrane	42.67	40.45

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102586933	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BVL6	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400020909
PGSC:PGSC0003DMG400020909	EnsemblPlants:PGSC0003DMT400053890	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF102	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002959803	RefSeq:XP_006367012.1	SEG:seg	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020909]

Coordinates

chr9:-:5861280..5863808

Molecular Weight (calculated)

42414.9 Da

IEP (calculated)

7.064

GRAVY (calculated)

-0.121

Length

382 amino acids

Sequence
(BLAST)

001: MKFSFPFLSC FSSSADTLEG SQTPYGGQIS QNFSVYSYND LKAATHGFRA SNKIGEGGFG SVYKGRLQDG SFMAVKVLSV ELESMRGERE FVSEIAALSD
101: IKHENLVNLR GCCVDGAHRL LVYDYMENNS LSLTFLGGEQ NRSKFTWTLR KEVSIGIAKG LSYLHEEVSP HVVHRDIKTS NILLDENFTP KIADFGLARL
201: FTENMSHIST RVAGTLGYLS PEYAISGHLT RKSDVYSFGV VLLEIVSGSP VVAFDITRGE HFLVNKAWEM YNADQLLELV DPVLDRELLN DDEALRFLKV
301: GLLCVQENAS LRPKMSMVIK MLSRDGAIIV DEMKITQPGI VADLMDVKIG RKHSSQSFFS KASTSMSPGS PFQIVKRRKS NS

Best Arabidopsis Sequence Match ( AT1G16670.1 )
(BLAST)

001: MGCSWLSCHR REATEVDGEI AAIDNVKIYK YREIRQATDD FSAENKIGEG GFGSVYKGCL KDGKLAAIKV LSAESRQGVK EFLTEINVIS EIQHENLVKL
101: YGCCVEGNHR ILVYNFLENN SLDKTLLAGG YTRSGIQFDW SSRANICVGV AKGLAFLHEE VRPHIIHRDI KASNILLDKY LSPKISDFGL ARLMPPNMTH
201: VSTRVAGTIG YLAPEYAVRG QLTRKADIYS FGVLLMEIVS GRSNKNTRLP TEYQYLLERA WELYERNELV DLVDSGLNGV FDAEEACRYL KIGLLCTQDS
301: PKLRPSMSTV VRLLTGEKDI DYKKISRPGL ISDFMDLKVR GPVATKTEQV NRQNYTNPSS SSNGSSRDHS NAYSSGASSA NAGNTFSSTI

Arabidopsis Description

CRPK1Cold-responsive protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93YN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.