Factsheet for PGSC0003DMT400057792

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
plasma membrane 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g078530.2.1	Tomato	cytosol	94.81	94.81
PGSC0003DMT400033378	Potato	plastid	74.59	73.78
KRH20479	Soybean	cytosol	66.67	66.48
KRH50012	Soybean	cytosol	65.85	65.67
KRH10841	Soybean	plastid	62.84	63.89
HORVU2Hr1G118980.1	Barley	mitochondrion	52.46	63.16
KRH21475	Soybean	cytosol, nucleus, plastid	62.3	60.48
KXG27447	Sorghum	cytosol	59.02	58.06
GSMUA_Achr1P17640_001	Banana	cytosol	59.84	57.94
GSMUA_AchrUn_...	Banana	mitochondrion	59.29	56.81
HORVU3Hr1G022880.1	Barley	cytosol, mitochondrion, nucleus, plastid	28.69	56.76
TraesCS2D01G564300.1	Wheat	cytosol	59.84	56.74
GSMUA_Achr3P14290_001	Banana	cytosol	58.2	56.35
TraesCS2A01G589900.1	Wheat	cytosol	59.56	56.33
Os04t0679200-01	Rice	cytosol	60.66	56.2
HORVU2Hr1G118950.1	Barley	mitochondrion, plastid	59.02	55.96
TraesCS2B01G594100.1	Wheat	cytosol	59.29	55.93
GSMUA_Achr11P...	Banana	cytosol	57.92	55.79
HORVU2Hr1G088080.1	Barley	mitochondrion, plastid	28.14	55.68
PGSC0003DMT400049201	Potato	cytosol	56.83	55.32
Zm00001d001813_P001	Maize	cytosol	58.74	55.27
VIT_00s0370g00010.t01	Wine grape	cytosol	66.39	55.1
HORVU4Hr1G061290.1	Barley	mitochondrion	22.13	54.73
Zm00001d017374_P002	Maize	cytosol	49.73	54.65
TraesCS7B01G229900.1	Wheat	cytosol	53.55	53.26
TraesCS7A01G329200.1	Wheat	cytosol	53.28	52.99
TraesCS7D01G326100.1	Wheat	cytosol, plastid	53.28	52.85
HORVU6Hr1G060250.5	Barley	mitochondrion	49.73	52.3
PGSC0003DMT400021884	Potato	cytosol, mitochondrion, nucleus, plasma membrane	55.46	50.37
TraesCS6A01G235400.1	Wheat	cytosol	29.23	50.0
HORVU6Hr1G058160.3	Barley	plasma membrane	25.41	49.21
Os02t0639100-00	Rice	cytosol	48.91	48.51
TraesCS6D01G218100.1	Wheat	plastid	28.69	48.17
KXG30706	Sorghum	mitochondrion, plastid	52.46	46.72
PGSC0003DMT400088826	Potato	cytosol	39.34	45.86
PGSC0003DMT400032254	Potato	cytosol	46.72	44.42
PGSC0003DMT400027119	Potato	cytosol	41.8	44.09
PGSC0003DMT400029343	Potato	cytosol, mitochondrion	46.45	44.04
PGSC0003DMT400053890	Potato	cytosol	43.44	41.62

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102600678	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1C1P0	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400022436
PGSC:PGSC0003DMG400022436	EnsemblPlants:PGSC0003DMT400057792	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF20	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296F09E	RefSeq:XP_015164151.1	SEG:seg	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:PGSC_GENE;Acc:PGSC0003DMG400022436]

Coordinates

chr2:+:34208173..34212424

Molecular Weight (calculated)

41170.1 Da

IEP (calculated)

6.782

GRAVY (calculated)

-0.376

Length

366 amino acids

Sequence
(BLAST)

001: MSCCCFGARK KGNDLVHHDT RDTGGDSIAS TKNFSFNELR LATNNFHQIN KIGRGGFGTV YKGTLTQGKE VAVKTLAAES RQGLREFLTE IETISNVKHP
101: NLVEIIGCCA DGNNRILVYE YLENRSLDQA LFGSRTSIKL EWEKRTTICL GTARGLAYLH EELVPHIVHR DIKASNILLD KDYTPKIGDF GLAKLFPDNI
201: THISTKIAGT TGYLAPEYVL GGQLTMKADV YSFGVLILEA VSGKSSSSRI WQSDKRSLLE WSWRLYQEEK LLELVDEELD DFPEKEVIRY IKTALFCTQA
301: NANRRPMMGQ VIEMLSRDIQ LNEKELTPPG FFEDSEDSSR SKLKMSECNT SQQSSVHITI TQVTPR

Best Arabidopsis Sequence Match ( AT3G09010.1 )
(BLAST)

001: MRYNCFGLLD MCNGSDRLGQ REAEEICTNN VRVFSYNSLR SATDSFHPTN RIGGGGYGVV FKGVLRDGTQ VAVKSLSAES KQGTREFLTE INLISNIHHP
101: NLVKLIGCCI EGNNRILVYE YLENNSLASV LLGSRSRYVP LDWSKRAAIC VGTASGLAFL HEEVEPHVVH RDIKASNILL DSNFSPKIGD FGLAKLFPDN
201: VTHVSTRVAG TVGYLAPEYA LLGQLTKKAD VYSFGILVLE VISGNSSTRA AFGDEYMVLV EWVWKLREER RLLECVDPEL TKFPADEVTR FIKVALFCTQ
301: AAAQKRPNMK QVMEMLRRKE LNLNEDALTE PGVYRGVNRG RNHRGIGLRV GQGGSSQESS STQRDKGKSS AVPQGSTSNS NISFQSITEL APR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LF75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.