Factsheet for VIT_10s0092g00520.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g00600.t01	Wine grape	mitochondrion, plasma membrane, plastid	13.86	79.31
VIT_12s0055g00610.t01	Wine grape	cytosol	30.72	66.67
VIT_12s0055g00640.t01	Wine grape	cytosol, mitochondrion, plastid	28.31	66.67
Os04t0616600-01	Rice	plasma membrane	42.77	53.18
GSMUA_AchrUn_...	Banana	cytosol	62.05	50.49
VIT_13s0019g04160.t01	Wine grape	cytosol	35.84	41.32
VIT_06s0004g06430.t01	Wine grape	cytosol	45.78	40.86
VIT_19s0027g00390.t01	Wine grape	cytosol	46.99	40.52
VIT_19s0014g01530.t01	Wine grape	mitochondrion	45.48	39.22
VIT_08s0007g02150.t01	Wine grape	cytosol	44.28	38.68
VIT_19s0014g00480.t01	Wine grape	cytosol	28.01	37.8
VIT_08s0040g01930.t01	Wine grape	cytosol, plastid	44.58	37.09
VIT_00s0370g00010.t01	Wine grape	cytosol	46.08	34.69
VIT_19s0014g00510.t01	Wine grape	plasma membrane	37.95	31.9
VIT_11s0052g00700.t01	Wine grape	plasma membrane	42.77	31.28
VIT_10s0092g00570.t01	Wine grape	mitochondrion, plasma membrane	77.11	27.44

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100252931	wikigene:100252931	MapMan:18.4.1.8.2	Gene3D:3.30.200.20	ProteinID:CBI39029
ProteinID:CBI39029.3	UniProt:D7U8G5	EMBL:FN596741	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100252931	wikigene:LOC100252931	PFAM:PF07714	PIRSF:PIRSF000654	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI00019842B5	ArrayExpress:VIT_10s0092g00520
EnsemblPlantsGene:VIT_10s0092g00520	EnsemblPlants:VIT_10s0092g00520.t01	RefSeq:XP_002272664	RefSeq:XP_002272664.2	:	:

Description

No Description!

Coordinates

chr10:-:12080997..12082934

Molecular Weight (calculated)

36466.8 Da

IEP (calculated)

6.400

GRAVY (calculated)

-0.031

Length

332 amino acids

Sequence
(BLAST)

001: MSIILICAVL YIKRKASYLN EDEEFLGIGP RPNTFSSSEL ETATEDFNLA NKLGEGAFWP VYKGALNDGR VVAVKQLSVA SQQGKSQFVA AIAAISAVQH
101: RNLVKLYGCC IEGNRWLLVY EHLENKSLDQ ALFGKNDLYL DWSIRFNTCL GTARGLAYLH EDSRPRTVHR DVKASSILLD AKLCPKISDF GLAKLYDDKK
201: THISGRVAGT IGYLAPAYAM RGHLTEKADA FGFGVVALEI LSGRPNSDNS LDTEKIYLLE WAWTLHENNR SLELDPTLTA FDETEASQII GVALLCTQAS
301: PMLRPTMSRI AAMLAGGIDV GIVTAKPSYL TD

Best Arabidopsis Sequence Match ( AT1G56130.1 )
(BLAST)

001: MQWMTFGINA LSGPVPKEIG LLTDLRLLGI SSNNFSGSIP DEIGRCTKLQ QMYIDSSGLS GRIPLSFANL VQLEQAWIAD LEVTDQIPDF IGDWTKLTTL
101: RIIGTGLSGP IPSSFSNLTS LTELRLGDIS SGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGEHSSLR QVDLSFNKLH GPIPASLFNL SQLTHLFLGN
201: NTLNGSFPTQ KTQSLRNVDV SYNDLSGSLP SWVSLPSLKL NLVANNFTLE GLDNRVLPGL NCLQKNFPCN RGKGIYSDFS INCGGPEKRS VTGALFERED
301: EDFGPASFFV SAGQRWAASS VGLFAGSSNN IYIATSQSQF VNTLDSELFQ SARLSASSVR YYGLGLENGG YTVTLQFAEI QILGSTSTTW KGLGRRRFDI
401: YVQGRLVEKD FDVRRTAGDS TVRAVQRVYK ANVSENHLEV HLFWAGKGTC CIPIQGAYGP LISAVSATPD FTPTVANKPP SKGKNRTGTI VGVIVGVGLL
501: SILAGVVMFT IRKRRKRYTD DEELLGMDVK PYIFTYSELK SATQDFDPSN KLGEGGFGPV YKGNLNDGRV VAVKLLSVGS RQGKGQFVAE IVAISSVLHR
601: NLVKLYGCCF EGEHRMLVYE YLPNGSLDQA LFGDKTLHLD WSTRYEICLG VARGLVYLHE EASVRIVHRD VKASNILLDS RLVPQISDFG LAKLYDDKKT
701: HISTRVAGTI GYLAPEYAMR GHLTEKTDVY AFGVVALELV SGRPNSDENL EEEKKYLLEW AWNLHEKSRD IELIDDKLTD FNMEEAKRMI GIALLCTQTS
801: HALRPPMSRV VAMLSGDVEI GDVTSKPGYV SDWRFDDTTG SSLSGFQIKD TTGYSMSLVA PGSEISPRDS DFKPMLGSKI NEGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.