Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0122701-00 | Rice | plastid | 13.35 | 44.55 |
| Os01t0121950-00 | Rice | cytosol, endoplasmic reticulum, nucleus | 36.5 | 33.52 |
| Os01t0121900-00 | Rice | cytosol | 20.77 | 23.65 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | EntrezGene:4326048 | EMBL:AK107171 | ProteinID:BAB40038.1 | ProteinID:BAF03795.1 |
| ProteinID:BAS70145.1 | ProteinID:EAZ10350.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | GO:GO:0061630 | InterPro:IPR008974 |
| InterPro:IPR013010 | InterPro:IPR013083 | EnsemblPlantsGene:Os01g0122200 | EnsemblPlants:Os01t0122200-01 | PFscan:PS51081 | PANTHER:PTHR10315 |
| PANTHER:PTHR10315:SF46 | UniProt:Q9ART8 | InterPro:SINA-like | SUPFAM:SSF49599 | InterPro:TRAF-like | UniParc:UPI00000AAF0F |
| RefSeq:XP_015640867.1 | RefSeq:XP_015640872.1 | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_SIAH | SEG:seg | : |
Description
Seven In Absentia Homolog-type domain containing protein. (Os01t0122200-01)
Coordinates
chr1:+:1254028..1255635
Molecular Weight (calculated)
34777.6 Da
IEP (calculated)
6.217
GRAVY (calculated)
0.145
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHGEQSGAK KAAAWVVSPN GQVKREMAVE AARGEGAAAA AGAGEEEEEV QAGGMIAAAV GDGFEGVEIS VRIDLAVLHC PLCLLPLKPP TYQCAAGHLA
101: CSSCHGDVPG KKCHTCGGGG GGGVYARCPG LDTFLRAAKI LCPNDLFGCR SYVAYHDVAA HQRACPHAPC SCSEPRCDFL GSPPMLLAHL VADHSWPVSK
201: VPYGEVLTIH VPESERRHLV VAGAAGGDDE RVFVLSVGAL GVARAVSVAC VRANAAAGPR YRCKLWAHAP GGGAADFVHM DSAVASSAAA PGGEVAVDEE
301: ARFLTVPPCF LHLLDAGTSK EMLIRLSISI DIDIDMS
101: CSSCHGDVPG KKCHTCGGGG GGGVYARCPG LDTFLRAAKI LCPNDLFGCR SYVAYHDVAA HQRACPHAPC SCSEPRCDFL GSPPMLLAHL VADHSWPVSK
201: VPYGEVLTIH VPESERRHLV VAGAAGGDDE RVFVLSVGAL GVARAVSVAC VRANAAAGPR YRCKLWAHAP GGGAADFVHM DSAVASSAAA PGGEVAVDEE
301: ARFLTVPPCF LHLLDAGTSK EMLIRLSISI DIDIDMS
001: MARFSVCGGD DGEGPSNNNH QSRKRQRLPS IDENEEDAET SDAGSSGEED EDETQNQGMR PESEDRGSTS DDSDREVVIE ERRFGKFVNS QSSSSSKDSP
101: LSVTLLDPDV LDCPICCEPL KIPIFQCDNG HLACTLCCTK VRNRCPSCTL PIGYVRCRAM EKVIEASRVS CLNAKYGCKE STSYGNRFSH EQVCVFTPCS
201: CPILDCHYTG YYKDLNNHVR AEHKDDLISF VWNTRLTISL DLNKKTTILQ EENDGHVIVV QVFRALHAVY VSVSCIAPLT PGVGRLSCRL AKITVDSLLK
301: QGFMVKNIQK VTNEHPEDGF MLIPSYLFSG NDNLNLQIWI GHGRIFVHS
101: LSVTLLDPDV LDCPICCEPL KIPIFQCDNG HLACTLCCTK VRNRCPSCTL PIGYVRCRAM EKVIEASRVS CLNAKYGCKE STSYGNRFSH EQVCVFTPCS
201: CPILDCHYTG YYKDLNNHVR AEHKDDLISF VWNTRLTISL DLNKKTTILQ EENDGHVIVV QVFRALHAVY VSVSCIAPLT PGVGRLSCRL AKITVDSLLK
301: QGFMVKNIQK VTNEHPEDGF MLIPSYLFSG NDNLNLQIWI GHGRIFVHS
Arabidopsis Description
E3 ubiquitin-protein ligase SINA-like 10 [Source:UniProtKB/Swiss-Prot;Acc:Q84K34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.