Factsheet for Os01t0215000-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
mitochondrion 3
endoplasmic reticulum 1
extracellular 1
golgi 1

Predictors

GFP

MS/MS

Papers

extracellular: 24083427
extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G163400.1	Wheat	extracellular, vacuole	67.27	71.35
TraesCS3D01G145900.1	Wheat	extracellular	67.01	70.88
TraesCS3A01G141200.1	Wheat	extracellular	65.97	69.78
HORVU3Hr1G028050.2	Barley	golgi, mitochondrion, plasma membrane, plastid	67.53	66.16
Os01t0223500-00	Rice	endoplasmic reticulum, plasma membrane	25.19	55.75
Os01t0223200-01	Rice	endoplasmic reticulum, extracellular, vacuole	52.73	53.56
Os01t0223000-01	Rice	plastid	51.95	52.08
Os01t0215500-01	Rice	extracellular	35.84	45.39
GSMUA_Achr10P...	Banana	extracellular, vacuole	43.38	45.14
Os01t0216500-00	Rice	extracellular	43.9	44.71
Os05t0210100-01	Rice	golgi	42.6	44.32
Os05t0506600-00	Rice	cytosol	42.08	43.78
Os06t0156600-01	Rice	plasma membrane	40.52	43.33
Os01t0214600-01	Rice	extracellular	39.22	43.27
Os01t0216300-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	43.12	43.01
Os05t0209600-01	Rice	extracellular, plasma membrane	40.26	42.94
Os06t0531600-01	Rice	mitochondrion	41.3	42.4
Os01t0215700-01	Rice	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	40.52	41.27
Os01t0214800-01	Rice	golgi	39.48	40.86
Solyc03g006240.2.1	Tomato	nucleus	38.96	40.76
KRH10999	Soybean	extracellular	38.96	40.11
PGSC0003DMT400011187	Potato	plasma membrane	38.7	40.05
Os06t0531900-01	Rice	golgi	41.04	40.0
KRH63839	Soybean	vacuole	37.14	38.44
KRH21298	Soybean	nucleus	38.96	38.27
AT5G45910.1	Thale cress	extracellular	36.88	38.17
Os06t0157000-01	Rice	extracellular	33.77	38.12
Os01t0649900-01	Rice	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	39.48	38.0
Os01t0216900-00	Rice	peroxisome, plastid, vacuole	40.78	37.92
KRG93967	Soybean	vacuole	35.32	37.88
Os06t0156700-01	Rice	plastid	39.74	37.87
KRH32795	Soybean	extracellular	35.32	37.78
Os01t0651000-01	Rice	extracellular, vacuole	36.1	37.57
Os01t0612900-01	Rice	extracellular, plasma membrane	39.74	37.5
Os01t0649400-00	Rice	mitochondrion	37.4	37.5
Os07t0642200-01	Rice	endoplasmic reticulum, golgi	37.92	37.34
Bra034320.1-P	Field mustard	extracellular	36.62	37.11
Os01t0649200-01	Rice	cytosol	15.06	36.94
Os03t0365900-01	Rice	cytosol	21.82	36.68
Os11t0521000-01	Rice	plasma membrane	35.32	36.46
Os03t0365800-01	Rice	extracellular, vacuole	36.62	36.43
Os01t0650200-01	Rice	golgi, mitochondrion, peroxisome, plastid	27.79	36.27
Os05t0210400-00	Rice	endoplasmic reticulum, plasma membrane	40.52	35.94
CDY48195	Canola	vacuole	36.62	35.25
CDX77066	Canola	extracellular	36.36	34.83
Os03t0365000-00	Rice	extracellular	29.35	34.35
KRH54432	Soybean	extracellular, plasma membrane, vacuole	26.23	34.24
Os01t0216000-01	Rice	plasma membrane	34.55	33.5
Os06t0694200-01	Rice	extracellular	32.73	33.25
Os02t0608801-00	Rice	extracellular	34.29	32.75
Os02t0604000-00	Rice	extracellular	30.39	28.82
Os01t0650900-00	Rice	vacuole	26.23	25.77
VIT_10s0003g01010.t01	Wine grape	cytosol	41.3	21.23
Os01t0216400-00	Rice	extracellular, vacuole	15.58	15.71
Os05t0506800-01	Rice	extracellular	2.6	2.67

Protein Annotations

EnsemblPlants:Os01t0215000-01	EnsemblPlantsGene:Os01g0215000	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF272	PFAM:PF00657	ProteinID:BAF04307.2	ProteinID:BAS71017.1	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52266	UniParc:UPI0001B666E0	UniProt:Q0JPM1	MapMan:35.1	:	:

Description

GDSL ESTERASE/LIPASE PROTEIN 4Lipase, GDSL domain containing protein. (Os01t0215000-01)

Coordinates

chr1:+:6288365..6292301

Molecular Weight (calculated)

42114.2 Da

IEP (calculated)

7.055

GRAVY (calculated)

-0.014

Length

385 amino acids

Sequence
(BLAST)

001: DIYNFSSHRH RRAPYSTYHT TMKLLRVVLV LLLPAVSSCL PCRRRDDYDY DSIFSFGDSF ADTGNGAVVF AEHSLFSPAT KPPYGMTFFG QPTGRNSNGR
101: LIIDFIAEKL GLPFVPPYLA HNGSFRQGAN FAVAGATSLD ASFFSDIPGV GKFVLNTSSS VQLGWFDSLK PLLCSPAQEC KGFFHKSLFF MGEFGVNDYS
201: FSVFGKTPLE VRSMVPDVVK TISSATERII KRDGAKAVVV PGIPPLGCMP PNLAMFPSTD PAGYEPGTGC LRQFNEIAVY HNTLLQDAIK NVQKNHPDVR
301: VIYADFFTPV IRIVQSPGTF GFTSDILRCC CGGGGKYNFN MSAGCGMPGA TVCEDPSTHL FWDGHMTEAA YHFIADGWLN SINES

Best Arabidopsis Sequence Match ( AT1G28570.1 )
(BLAST)

001: MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN

Arabidopsis Description

GDSL esterase/lipase At1g28570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.