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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
extracellular: 24083427
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G008900.2 Wheat plastid 5.87 5.14
HORVU5Hr1G061880.5 Barley extracellular, vacuole 2.67 2.63
Os01t0215000-01 Rice extracellular 2.67 2.6
Os05t0210400-00 Rice endoplasmic reticulum, plasma membrane 2.67 2.3
Os06t0531900-01 Rice golgi 2.4 2.28
TraesCS5B01G208900.1 Wheat extracellular 2.13 2.23
GSMUA_Achr10P... Banana extracellular, vacuole 2.13 2.16
HORVU5Hr1G061860.1 Barley extracellular 2.13 2.14
TraesCS5A01G214900.1 Wheat extracellular 2.13 2.14
Os05t0506600-00 Rice cytosol 1.87 1.89
TraesCS5B01G209000.1 Wheat extracellular 1.87 1.89
TraesCS5D01G217100.1 Wheat extracellular, plasma membrane, vacuole 1.87 1.87
Zm00001d038645_P001 Maize extracellular, vacuole 2.13 1.86
Os01t0215700-01 Rice endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 1.87 1.85
Os01t0216500-00 Rice extracellular 1.87 1.85
Os01t0649400-00 Rice mitochondrion 1.87 1.82
Os03t0365900-01 Rice cytosol 1.07 1.75
Os06t0156700-01 Rice plastid 1.87 1.73
Os01t0214600-01 Rice extracellular 1.6 1.72
KRH54432 Soybean extracellular, plasma membrane, vacuole 1.33 1.69
Os01t0216900-00 Rice peroxisome, plastid, vacuole 1.87 1.69
KRH32795 Soybean extracellular 1.6 1.67
Os06t0156600-01 Rice plasma membrane 1.6 1.67
Os05t0209600-01 Rice extracellular, plasma membrane 1.6 1.66
Os01t0215500-01 Rice extracellular 1.33 1.64
TraesCS5B01G211600.1 Wheat extracellular 1.6 1.63
TraesCS5D01G221700.1 Wheat extracellular 1.6 1.63
Solyc03g006240.2.1 Tomato nucleus 1.6 1.63
Os05t0210100-01 Rice golgi 1.6 1.62
PGSC0003DMT400011187 Potato plasma membrane 1.6 1.61
KRH10999 Soybean extracellular 1.6 1.6
Os06t0531600-01 Rice mitochondrion 1.6 1.6
Os06t0694200-01 Rice extracellular 1.6 1.58
Os01t0223000-01 Rice plastid 1.6 1.56
Os01t0216300-01 Rice endoplasmic reticulum, extracellular, plasma membrane 1.6 1.55
Os03t0365800-01 Rice extracellular, vacuole 1.6 1.55
KRH21298 Soybean nucleus 1.6 1.53
Os06t0157000-01 Rice extracellular 1.33 1.47
KRG93967 Soybean vacuole 1.33 1.39
Os01t0650200-01 Rice golgi, mitochondrion, peroxisome, plastid 1.07 1.36
AT5G45910.1 Thale cress extracellular 1.33 1.34
KRH63839 Soybean vacuole 1.33 1.34
Os01t0214800-01 Rice golgi 1.33 1.34
Os11t0521000-01 Rice plasma membrane 1.33 1.34
Os01t0223200-01 Rice endoplasmic reticulum, extracellular, vacuole 1.33 1.32
Bra034320.1-P Field mustard extracellular 1.33 1.32
Os07t0642200-01 Rice endoplasmic reticulum, golgi 1.33 1.28
Os01t0650900-00 Rice vacuole 1.33 1.28
Os01t0216000-01 Rice plasma membrane 1.33 1.26
CDY48195 Canola vacuole 1.33 1.25
Os01t0649900-01 Rice endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 1.33 1.25
CDX77066 Canola extracellular 1.33 1.24
Os02t0608801-00 Rice extracellular 1.33 1.24
Os01t0612900-01 Rice extracellular, plasma membrane 1.33 1.23
Os03t0365000-00 Rice extracellular 1.07 1.22
Os01t0223500-00 Rice endoplasmic reticulum, plasma membrane 0.53 1.15
Os01t0651000-01 Rice extracellular, vacuole 1.07 1.08
Os02t0604000-00 Rice extracellular 1.07 0.99
VIT_10s0003g01010.t01 Wine grape cytosol 1.6 0.8
Os01t0649200-01 Rice cytosol 0.27 0.64
Os01t0216400-00 Rice extracellular, vacuole 0.27 0.26
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:9269310EMBL:AK241401UniProt:B7F8S4ProteinID:BAS94803.1
ProteinID:EEE64297.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788
InterPro:IPR036514EnsemblPlantsGene:Os05g0506800EnsemblPlants:Os05t0506800-01PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF475
InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000F196A0RefSeq:XP_015637972.1
SEG:seg:::::
Description
GDSL ESTERASE/LIPASE PROTEIN 72Hypothetical conserved gene. (Os05t0506800-01)
Coordinates
chr5:-:25035919..25038954
Molecular Weight (calculated)
40952.5 Da
IEP (calculated)
7.245
GRAVY (calculated)
0.190
Length
375 amino acids
Sequence
(BLAST)
001: MELKLVFFLV FLFCISGASS ISHYFTSIFS LGDSYIDTGN FVIMAPSGLP LRYDKLPYGM TFFGHPTGRM SDGRVIVDFI AEEFELPLLP ASMANSSSVS
101: NGVNFAVGGA LATGIDYFER NNIVSFKLLN TSLDVQLGWF EQLKPSICNT TTEQANGFKN CFGKSLFFVG EFGVNDYDFL WMAGKSKQEV ESYVPQVVRK
201: ITMGVEMLIN QGAIYVVVAG NPPNGCAPAL LTVLMSPNRT DYDGLGCLGA LNGVAKRHNM MLRVALGRLR GKYPHAKIIF ADFYQPIIQV MRNPSHFGFA
301: SDGLLKACCG TGGTYNFNVS SACALPGVVA CKDPSASISW DGIHYTEAIN RFVAKGWLYG PYADPPILTA IHHHH
Best Arabidopsis Sequence Match ( AT1G28570.1 )
(BLAST)
001: MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY
101: GSQNANFEKG VNFAVGGATA LERSFLEERG IHFPYTNVSL AVQLSSFKES LPNLCVSPSD CRDMIENSLI LMGEIGGNDY NYAFFVGKNI EEIKELVPLV
201: IETISSAITE LIGMGGKTFL VPGEFPLGCS VAYLSLYQTS NIEEYDPLTG CLKWLNKFSE YHDEQLQAEL NRLQKLYPHV NIIYADYYNT LLRLAQEPAK
301: FGFISRPLPA CCALGGPFNF TLGRKRGTQV PECCDDPSKY VSWDGVHMTE AAYRLMAEGI LKGPYAIPPF DWSCLSSEIK NTQNSLMNN
Arabidopsis Description
GDSL esterase/lipase At1g28570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXJ1]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.