Factsheet for Os02t0244700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053453_P002	Maize	cytosol	88.33	95.42
Zm00001d016166_P001	Maize	extracellular, plasma membrane	94.42	95.21
EES04831	Sorghum	cytosol	94.21	95.0
TraesCS6A01G195600.1	Wheat	cytosol, extracellular	94.63	94.63
TraesCS6D01G183200.1	Wheat	cytosol, golgi	94.42	94.42
TraesCS6B01G223100.1	Wheat	cytosol, golgi, unclear	94.32	94.32
HORVU6Hr1G048410.6	Barley	cytosol	94.01	94.01
Os08t0366000-01	Rice	cytosol, plasma membrane	84.09	84.44
Os01t0758300-01	Rice	cytosol, plasma membrane	80.48	84.31
Os01t0208700-01	Rice	plasma membrane	76.76	73.27
HORVU7Hr1G080510.4	Barley	cytosol	58.88	72.52
Os01t0110700-01	Rice	cytosol	33.57	31.4

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
EntrezGene:4328859	EMBL:AK065029	EMBL:AK065425	ProteinID:BAD27732.1	ProteinID:BAF08331.1	ProteinID:BAS77859.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006091	GO:GO:0006099	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008964	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015977
GO:GO:0048046	GO:GO:0048366	HAMAP:MF_00595	EnsemblPlantsGene:Os02g0244700	EnsemblPlants:Os02t0244700-01	InterPro:PEPCASE_His_AS
InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS	InterPro:PEP_COase_bac/pln-type	PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393
ScanProsite:PS00781	PANTHER:PTHR30523	PANTHER:PTHR30523:SF10	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	UniProt:Q6EUD7	SUPFAM:SSF51621
UniParc:UPI00003CE4CF	RefSeq:XP_015624648.1	SEG:seg	:	:	:

Description

PEP carboxylase 1, Phosphoenolpyruvate carboxylase 1, PEPCase 1Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-01);Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-02);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-03);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-04)

Coordinates

chr2:-:8172421..8184167

Molecular Weight (calculated)

109939.0 Da

IEP (calculated)

6.147

GRAVY (calculated)

-0.352

Length

968 amino acids

Sequence
(BLAST)

001: MAAAAGKAAM ERHQSIDAQL RLLAPGKVSE DDKLVEYDAL LVDRFLDILQ DLHGPHLREF VQECYELSAE YENDRDEARL DELGRKLTSL PPGDSIVVSS
101: SFSHMLNLAN LAEEVQIAHR RRIKLKRGDF ADEASAPTES DIEETLKRLV TQLGKSREEV FDALKNQTVD LVFTAHPTQS VRRSLLQKHG RIRNCLRQLY
201: AKDITADDKQ ELDEALQREI QAAFRTDEIR RTPPTPQDEM RAGMSYFHET IWKGVPKFLR RIDTALKNIG INERLPYNAP LIQFSSWMGG DRDGNPRVTP
301: EVTRDVCLLA RMMAANLYFS QIEDLMFELS MWRCSDELRI RADDLHCSSR KAAKHYIEFW KQIPPNEPYR VILGGVRDKL YYTRERTRHL LTTGVSEIPE
401: EATFTNVEEF LEPLELCYRS LCACGDKPIA DGSLLDFLRQ VSTFGLALVK LDIRQESDRH TDVLDAITTY LGIGSYAEWS EEKRQDWLLS ELRGKRPLFG
501: PDLPQTEEIA DVLGTFHVLA ELPADCFGAY IISMATAPSD VLAVELLQRE CHIKQPLRVV PLFEKLADLE AAPAAVARLF SIDWYMNRIN GKQEVMIGYS
601: DSGKDAGRLS AAWQMYKAQE ELVKVAKHYG VKLTMFHGRG GTVGRGGGPS HLAILSQPPD TIHGSLRVTV QGEVIEHSFG EEHLCFRTLQ RFTAATLEHG
701: MHPPISPKPE WRALMDEMAV VATKEYRSIV FKEPRFVEYF RSATPETEYG RMNIGSRPSK RKPSGGIESL RAIPWIFAWT QTRFHLPVWL GFGGAFKHIM
801: QKDIRNIHTL KEMYNEWPFF RVTLDLLEMV FAKGDPGIAA LYDKLLVAGD LQSFGEQLRN NFEETKQLLL QVAGHKDILE GDPYLKQRLR LRESYITTLN
901: VCQAYTLKRI RDPSFEVMSQ PALSKEFVDS NQPAELVQLN AASEYAPGLE DTLILTMKGI AAGMQNTG

Best Arabidopsis Sequence Match ( AT2G42600.3 )
(BLAST)

001: MAARNLEKMA SIDAQLRLLA PGKVSEDDKL IEYDALLLDR FLDILQDLHG EDVREFVQEC YEVAADYDGN RNTEKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAER QRCAKRDAKH YIEFWKQIPA NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDVPEDAVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESERHSDVLD AITTHLGIGS YKEWSEDKRQ EWLLSELSGK RPLFGPDLPK
501: TEEVADVLDT FKVISELPSD SFGAYIISMA TAPSDVLAVE LLQRECGITD PLRVVPLFEK LADLESAPAA VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEYGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAIIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGGA FKRVIQKDSK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLSK DYMESSPAAE LVKLNPKSEY APGLEDTVIL TMKGIAAGMQ NTG

Arabidopsis Description

PPC2PPC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.