Factsheet for TraesCS6B01G223100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, unclear
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 23128297
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G195600.1	Wheat	cytosol, extracellular	99.17	99.17
TraesCS6D01G183200.1	Wheat	cytosol, golgi	98.97	98.97
HORVU6Hr1G048410.6	Barley	cytosol	97.83	97.83
Zm00001d016166_P001	Maize	extracellular, plasma membrane	93.59	94.38
Os02t0244700-01	Rice	plasma membrane	94.32	94.32
Zm00001d053453_P002	Maize	cytosol	87.29	94.31
EES04831	Sorghum	cytosol	93.49	94.27
TraesCS7B01G237900.1	Wheat	cytosol	81.2	88.22
TraesCS5B01G179800.1	Wheat	cytosol, extracellular, golgi, unclear	83.37	83.02
TraesCS3B01G329800.1	Wheat	cytosol, golgi	82.64	82.82
TraesCS3B01G168000.1	Wheat	cytosol	74.9	72.36
TraesCS3B01G011200.1	Wheat	cytosol	31.82	31.79
TraesCS3B01G008500.1	Wheat	cytosol	32.54	30.11

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152
GO:GO:0008964	GO:GO:0009987	GO:GO:0015977	HAMAP:MF_00595	InterPro:PEPCASE_His_AS	InterPro:PEP_COase
InterPro:PEP_COase_Lys_AS	InterPro:PEP_COase_bac/pln-type	PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393	ScanProsite:PS00781
PANTHER:PTHR30523	PANTHER:PTHR30523:SF10	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	EnsemblPlantsGene:TraesCS6B01G223100	EnsemblPlants:TraesCS6B01G223100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:331034268..331051916

Molecular Weight (calculated)

110061.0 Da

IEP (calculated)

6.082

GRAVY (calculated)

-0.377

Length

968 amino acids

Sequence
(BLAST)

001: MAAPSGKAAM ERHQSIDAQL RLLVPGKVSE DDKLVEYDAL LVDRFLDILQ DLHGPHLREF VQECYELSAE YETDRDEARI GELGGKLTSL SPADSIVVSS
101: SFSHMLNLAN LAEEVQIAFR RRSKLKRGDL GDEASAPTES DIEETLKRLV SELGKSREEV FDSLKNQTVD LVFTAHPTQS VRRSLLQKHG RIRNCLRQLY
201: AKDITADDKQ ELDEALQREI QAAFRTDEIR RTPPTPQDEM RAGMSYFHET IWKGVPKFLR RIDTALKNIG INERLPYNAP LIQFSSWMGG DRDGNPRVTP
301: EVTRDVCLLA RMMAANLYFS QIEDLMFELS MWRCSDELRV RADELHRSSK KSAKHYIEFW KQVPSNEPYR VILGDVRDKL YYTRERSRHI LTTGVSDIPE
401: ESTFTNVEMF LEPLELCYRS LCACGDKPIA DGSLLDFLRQ VSTFGLALVK LDIRQESDRH TDVLDTITTH LGIGSYAEWS EEKRQEWLLS ELRGKRPLFG
501: SDLPQTEEVA DVLGTFHILA ELPADCFGAY IISMATAPSD VLAVELLQRE CHIKKPLRVV PLFEKLADLE AAPAAVARLF SVDWYMDRIN GKQEVMIGYS
601: DSGKDAGRLS AAWQMYKAQE ELIKVAKHYG VKLTMFHGRG GTVGRGGGPS HLAILSQPPD TIHGSLRVTV QGEVIEHSFG EEHLCFRTLQ RFTAATLEHG
701: MHPPISPKPE WRALMDEMAV VATKEYRSIV FQEPRFVEYF RSATPETEYG RMNIGSRPSK RKPSGGIESL RAIPWIFAWT QTRFHLPVWL GFGAAFKHII
801: QKDIRNIHTL KEMYNEWPFF RVTLDLLEMV FAKGDPGIAA LYDKLLVAED LQSFGEQLRQ NFEETKQLLL QVAGHKDVLE GDPYLKQRLR LRESYITTLN
901: VCQAYTLKRI RDPSFEVTPQ QPPLSKEFCD KEPAELVQLN RGSEYAPGLE DTLILTMKGI AAGMQNTG

Best Arabidopsis Sequence Match ( AT2G42600.1 )
(BLAST)

001: MAARNLEKMA SIDAQLRLLA PGKVSEDDKL IEYDALLLDR FLDILQDLHG EDVREFVQEC YEVAADYDGN RNTEKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAER QRCAKRDAKH YIEFWKQIPA NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDVPEDAVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESERHSDVLD AITTHLGIGS YKEWSEDKRQ EWLLSELSGK RPLFGPDLPK
501: TEEVADVLDT FKVISELPSD SFGAYIISMA TAPSDVLAVE LLQRECGITD PLRVVPLFEK LADLESAPAA VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEYGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAIIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGGA FKRVIQKDSK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLSK DYMESSPAAE LVKLNPKSEY APGLEDTVIL TMKGIAAGMQ NTG

Arabidopsis Description

PPC2PPC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.