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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
extracellular: 19786127
msms PMID: 19786127 doi
FJ Kong, A Oyanagi, S Komatsu
National Institute of Crop Science, Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G183200.1 Wheat cytosol, golgi 99.59 99.59
TraesCS6B01G223100.1 Wheat cytosol, golgi, unclear 99.17 99.17
HORVU6Hr1G048410.6 Barley cytosol 98.24 98.24
Os02t0244700-01 Rice plasma membrane 94.63 94.63
Zm00001d053453_P002 Maize cytosol 87.5 94.53
Zm00001d016166_P001 Maize extracellular, plasma membrane 93.7 94.48
EES04831 Sorghum cytosol 93.59 94.38
TraesCS7A01G345400.1 Wheat cytosol 85.02 89.65
TraesCS5A01G181800.1 Wheat cytosol, golgi 83.57 83.23
TraesCS3A01G306700.1 Wheat cytosol 82.33 82.51
TraesCS3A01G134200.1 Wheat cytosol 74.38 71.78
Protein Annotations
KEGG:00620+4.1.1.31KEGG:00680+4.1.1.31KEGG:00710+4.1.1.31KEGG:00720+4.1.1.31Gene3D:1.20.1440.90MapMan:1.4.1.1
GO:GO:0003674GO:GO:0003824GO:GO:0006091GO:GO:0006099GO:GO:0008150GO:GO:0008152
GO:GO:0008964GO:GO:0009987GO:GO:0015977HAMAP:MF_00595InterPro:PEPCASE_His_ASInterPro:PEP_COase
InterPro:PEP_COase_Lys_ASInterPro:PEP_COase_bac/pln-typePFAM:PF00311PRINTS:PR00150ScanProsite:PS00393ScanProsite:PS00781
PANTHER:PTHR30523PANTHER:PTHR30523:SF10InterPro:Pyrv/PenolPyrv_Kinase-like_domSUPFAM:SSF51621EnsemblPlantsGene:TraesCS6A01G195600EnsemblPlants:TraesCS6A01G195600.1
SEG:seg:::::
Description
No Description!
Coordinates
chr6A:-:282127763..282147967
Molecular Weight (calculated)
110098.0 Da
IEP (calculated)
6.015
GRAVY (calculated)
-0.370
Length
968 amino acids
Sequence
(BLAST)
001: MAAPSGKAAM ERHQSIDAQL RLLVPGKVSE DDKLVEYDAL LVDRFLDILQ DLHGPHLREF VQECYELSAE YETDRDEARI AELGSKLTSL SPADSIVVSS
101: SFSHMLNLAN LAEEVQIAFR RRSKLKRGDF GDEASAPTES DIEETLKRLV SELGKSREEV FDALKNQTVD LVFTAHPTQS VRRSLLQKHG RIRNCLRQLY
201: AKDITADDKQ ELDEALQREI QAAFRTDEIR RTPPTPQDEM RAGMSYFHET IWKGVPKFLR RIDTALKNIG INERLPYNAP LIQFSSWMGG DRDGNPRVTP
301: EVTRDVCLLA RMMAANLYFS QIEDLMFELS MWRCSDELRV RADELHCSSK KSAKHYIEFW KQVPSNEPYR VILGDVRDKL YYTRERSRHI LTTGVSDIPE
401: ESTFTNVEMF LEPLELCYRS LCACGDKPIA DGSLLDFLRQ VSTFGLALVK LDIRQESDRH TDVLDTITTH LGIGSYAEWS EEKRQEWLLS ELRGKRPLFG
501: SDLPQTEEVA DVLSTFHILA ELPADCFGAY IISMATAPSD VLAVELLQRE CHIKKPLRVV PLFEKLADLE AAPAAVARLF SIDWYMDRIN GKQEVMIGYS
601: DSGKDAGRLS AAWQMYKAQE ELIKVAKHYG VKLTMFHGRG GTVGRGGGPS HLAILSQPPD TIHGSLRVTV QGEVIEHSFG EEHLCFRTLQ RFTAATLEHG
701: MHPPISPKPE WRALMDEMAV VATKEYRSIV FQEPRFVEYF RSATPETEYG RMNIGSRPSK RKPSGGIESL RAIPWIFAWT QTRFHLPVWL GFGAAFKHII
801: QKDIRNIHTL KEMYNEWPFF RVTLDLLEMV FAKGDPGIAA LYDKLLVAED LQSFGEQLRQ NFEETKQLLL QVAGHKDVLE GDPYLKQRLR LRESYITTLN
901: VCQAYTLKRI RDPSFEVTPQ QPPLSKEFSD KEPAELVQLN RGSEYAPGLE DTLILTMKGI AAGMQNTG
Best Arabidopsis Sequence Match ( AT2G42600.3 )
(BLAST)
001: MAARNLEKMA SIDAQLRLLA PGKVSEDDKL IEYDALLLDR FLDILQDLHG EDVREFVQEC YEVAADYDGN RNTEKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAER QRCAKRDAKH YIEFWKQIPA NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDVPEDAVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESERHSDVLD AITTHLGIGS YKEWSEDKRQ EWLLSELSGK RPLFGPDLPK
501: TEEVADVLDT FKVISELPSD SFGAYIISMA TAPSDVLAVE LLQRECGITD PLRVVPLFEK LADLESAPAA VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEYGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAIIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGGA FKRVIQKDSK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLSK DYMESSPAAE LVKLNPKSEY APGLEDTVIL TMKGIAAGMQ NTG
Arabidopsis Description
PPC2PPC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV64]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.