Factsheet for Os03t0226800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0226901-00	Rice	plasma membrane	1.98	2.98
Os01t0738300-01	Rice	cytosol	1.51	2.38
Os01t0750600-01	Rice	plasma membrane	0.85	1.32
Os01t0110500-01	Rice	plasma membrane	0.85	1.29
Os06t0488050-00	Rice	plasma membrane	0.85	1.29
Os05t0516400-01	Rice	plastid	0.94	1.21
Os03t0568800-01	Rice	cytosol, nucleus, plastid	0.76	1.19
Os06t0486000-01	Rice	plasma membrane	0.76	1.07
Os03t0269300-01	Rice	mitochondrion	0.57	1.06
Os05t0218400-01	Rice	plasma membrane	0.66	1.04
Os01t0227200-01	Rice	plasma membrane	0.47	0.84
Os07t0137800-00	Rice	plasma membrane	0.28	0.56
Os01t0602800-01	Rice	cytosol, mitochondrion, nucleus, plasma membrane	0.19	0.27
Os10t0104800-01	Rice	plastid	0.0	0.0
Os09t0314800-00	Rice	cytosol, mitochondrion, plasma membrane	0.0	0.0
Os05t0589700-01	Rice	cytosol, nucleus, plasma membrane	0.0	0.0
Os05t0100700-02	Rice	plasma membrane	0.0	0.0
Os03t0776100-00	Rice	plasma membrane	0.0	0.0

Protein Annotations

KEGG:00270+2.1.1.37	MapMan:12.5.2.3	Gene3D:2.30.30.490	Gene3D:3.40.50.150	Gene3D:3.90.120.20	EntrezGene:4332128
UniProt:A0A0P0VUY4	ProteinID:AAN60988.1	ProteinID:ABF94750.1	ProteinID:BAF11356.2	ProteinID:BAH37020.1	InterPro:BAH_dom
ProteinID:BAS83066.1	InterPro:C5_DNA_meth_AS	InterPro:C5_MeTfrase	InterPro:Chromo-like_dom_sf	InterPro:Chromo/chromo_shadow_dom	InterPro:Chromo_domain
InterPro:Chromodomain_CS	ncoils:Coil	InterPro:DNMT1-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003682	GO:GO:0003824	GO:GO:0003886	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0032259	GO:GO:0090116	InterPro:IPR000953	InterPro:IPR001025	InterPro:IPR001525	EnsemblPlantsGene:Os03g0226800
EnsemblPlants:Os03t0226800-01	PFAM:PF00145	PFAM:PF00385	PFAM:PF01426	PIRSF:PIRSF037404	PRINTS:PR00105
ScanProsite:PS00094	ScanProsite:PS00598	PFscan:PS50013	PFscan:PS51038	PFscan:PS51679	PANTHER:PTHR10629
PANTHER:PTHR10629:SF28	InterPro:SAM-dependent_MTases	SMART:SM00298	SMART:SM00439	SUPFAM:SSF53335	SUPFAM:SSF54160
UniParc:UPI000393BEF4	RefSeq:XP_015630016.1	SEG:seg	:	:	:

Description

CHROMOMETHYLTRANSFERASE 1Similar to Cytosine-specific methyltransferase. (Os03t0226800-01)

Coordinates

chr3:+:6657601..6663830

Molecular Weight (calculated)

118886.0 Da

IEP (calculated)

5.102

GRAVY (calculated)

-0.649

Length

1059 amino acids

Sequence
(BLAST)

0001: MVPEPAPAAA TEPRRSTRRR LMTAAAMEAE AEAVADLDEI DREMSRAESR KRQRRTAKEK PGARKGATEW KPEDVEKAAA AEGVAELDEI DREMPRPELR
0101: KRQRRTAKEK PSAHEGATEW KPEDVEKAAA QEPEGTELDS GLSPAESRGK RQRGVEKVKR RTRKKTAKEK TKETTEKSAA QAPEKMKVND AGGALAEDVC
0201: ADEPDAEQMA MEEEEEAADV LEAEERMGKC VGEGSAEKAA TRKRVARPST ARRVEDSDDH FVGDPVPDDE ARQRWPVRYS RKGSDSLLKQ EPDEDEEMKA
0301: RCHYLAANVD DEIYHLDDDV YVKAGPDEEN YIGRITEFFE GVDRGSYFSC QWFFRTADTV ISSKLLKVHD HRHNHKRVFL SKEKNDNLIE CIVSKVKIAH
0401: VDPNMTPQAR AHAISDCDLY YDMSYSVAYS TFANLPADND GALGSEATSN ISCDDADNSS KGKLSADIVA PYSEQTETAS LLDLYSGCGA MSTGLCLGFA
0501: FSGINLETRW AVDINKYACA CLKHNHPYSQ VRNEKTEDFL ALIQQWDALC RKYVVHKNDT LEPSIDMPLN DADDVNEPLP EDIFDVEELL EICYGDPSNT
0601: GKNGLWFKVR WKGYDPSYDT WEPIDGLSDC PERIKEFVEK GHKENILPLP GAVDVICGGP PCQGISGFNR FRKHNDPLED EKNKQLVVFM DIVKYLRPKY
0701: VLMENVVDIL KFADGFLGRY AMSCLVAMNY QARLGMMAAG YYGLPQFRMR AFLWGALPSM VLPKFPLPTH DAVVRGIVPT TFSQSVVAYN EVDTRCLRKA
0801: LLLADAISDL PKVGNDQPKD VIEYSVAPKT EFQRYIRNNR KDIQDYSFRG DDPSEEGKLF DHQPLKLNKD DYERVQRIPV KKGANFRDLK GVIVGPDNTV
0901: RLDPNISRER LSSGKPLVPD YAISFVKGKS TKPFGRLWWD ETVPTVVTRA EPHNQIILHP SQDRVLTIRE NARLQGFPDY YRLIGPLKEK YIQVGNAVAI
1001: PVARALGYAL GLAYRGESDG DRAVLKLPES FIYADQETVV KSSAGTPGSE IADSEQLFE

Best Arabidopsis Sequence Match ( AT1G69770.1 )
(BLAST)

001: MAPKRKRPAT KDDTTKSIPK PKKRAPKRAK TVKEEPVTVV EEGEKHVARF LDEPIPESEA KSTWPDRYKP IEVQPPKASS RKKTKDDEKV EIIRARCHYR
101: RAIVDERQIY ELNDDAYVQS GEGKDPFICK IIEMFEGANG KLYFTARWFY RPSDTVMKEF EILIKKKRVF FSEIQDTNEL GLLEKKLNIL MIPLNENTKE
201: TIPATENCDF FCDMNYFLPY DTFEAIQQET MMAISESSTI SSDTDIREGA AAISEIGECS QETEGHKKAT LLDLYSGCGA MSTGLCMGAQ LSGLNLVTKW
301: AVDMNAHACK SLQHNHPETN VRNMTAEDFL FLLKEWEKLC IHFSLRNSPN SEEYANLHGL NNVEDNEDVS EESENEDDGE VFTVDKIVGI SFGVPKKLLK
401: RGLYLKVRWL NYDDSHDTWE PIEGLSNCRG KIEEFVKLGY KSGILPLPGG VDVVCGGPPC QGISGHNRFR NLLDPLEDQK NKQLLVYMNI VEYLKPKFVL
501: MENVVDMLKM AKGYLARFAV GRLLQMNYQV RNGMMAAGAY GLAQFRLRFF LWGALPSEII PQFPLPTHDL VHRGNIVKEF QGNIVAYDEG HTVKLADKLL
601: LKDVISDLPA VANSEKRDEI TYDKDPTTPF QKFIRLRKDE ASGSQSKSKS KKHVLYDHHP LNLNINDYER VCQVPKRKGA NFRDFPGVIV GPGNVVKLEE
701: GKERVKLESG KTLVPDYALT YVDGKSCKPF GRLWWDEIVP TVVTRAEPHN QVIIHPEQNR VLSIRENARL QGFPDDYKLF GPPKQKYIQV GNAVAVPVAK
801: ALGYALGTAF QGLAVGKDPL LTLPEGFAFM KPTLPSELA

Arabidopsis Description

CMT3DNA (cytosine-5)-methyltransferase CMT3 [Source:UniProtKB/Swiss-Prot;Acc:Q94F88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.