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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • plasma membrane 1
  • plastid 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:plasma membrane
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G290100.1 Wheat cytosol 46.63 72.6
Zm00001d012743_P002 Maize cytosol 41.79 69.51
KXG33373 Sorghum plastid 69.5 66.67
Zm00001d043480_P001 Maize plastid 69.79 64.76
Os05t0100700-02 Rice plasma membrane 22.14 57.41
HORVU3Hr1G071830.1 Barley mitochondrion 63.34 57.07
TraesCS3A01G290300.2 Wheat plastid 62.9 54.86
TraesCS3B01G325100.2 Wheat plastid 63.49 53.39
GSMUA_Achr3P15710_001 Banana plastid 49.27 46.03
Os01t0227200-01 Rice plasma membrane 39.44 45.06
Os05t0516400-01 Rice plastid 54.4 44.86
Os05t0218400-01 Rice plasma membrane 44.28 44.74
Os09t0314800-00 Rice cytosol, mitochondrion, plasma membrane 18.91 43.88
Os07t0137800-00 Rice plasma membrane 33.58 42.57
Os03t0269300-01 Rice mitochondrion 35.19 42.25
Os10t0104800-01 Rice plastid 33.43 40.14
Os03t0226901-00 Rice plasma membrane 37.98 36.79
Os03t0568800-01 Rice cytosol, nucleus, plastid 36.22 36.59
Os01t0110500-01 Rice plasma membrane 37.39 36.53
Os06t0488050-00 Rice plasma membrane 37.39 36.48
Os01t0738300-01 Rice cytosol 35.04 35.62
Os06t0486000-01 Rice plasma membrane 34.75 31.68
Os01t0602800-01 Rice cytosol, mitochondrion, nucleus, plasma membrane 23.75 21.63
Os05t0589700-01 Rice cytosol, nucleus, plasma membrane 9.24 12.91
Os03t0226800-01 Rice plasma membrane 1.32 0.85
Os03t0776100-00 Rice plasma membrane 0.0 0.0
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.22Gene3D:3.30.200.20EntrezGene:4324628EMBL:AK064397EMBL:AK102832
ProteinID:BAD87097.1ProteinID:BAF06169.1ProteinID:BAS74360.1ProteinID:EEE55387.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
GO:GO:0038023InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os01g0750600EnsemblPlants:Os01t0750600-01PFAM:PF07714
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF106InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSUniProt:Q5JN60SMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_AS
TMHMM:TMhelixUniParc:UPI00004C288BRefSeq:XP_015624916.1SEG:seg::
Description
Protein kinase-like domain containing protein. (Os01t0750600-01)
Coordinates
chr1:-:31473999..31477461
Molecular Weight (calculated)
71556.7 Da
IEP (calculated)
7.791
GRAVY (calculated)
-0.374
Length
682 amino acids
Sequence
(BLAST)
001: MSSQAPSAPV TPAAPPPQTP PVTPPPVTAP PPVSPPPVTP PPVTPPPVSP PPVSPPPVTP PPVSPPPVTP PPVTPPTPVA PPPVPPSPPP PTPTPTPVTP
101: SPPPPVTPSP PPPVASPPPP DVPTAPPPSN NPPSPPPSPS NVPASPPPPR ISLSPPPPPS TPTQSGASSG SKSSNNGTVV AVGVAVAAVV VLGLAAGLIY
201: FFVSKRRRRR QHPPPPHHPG YPPFPAEFYD PHRPPSQQQS HALSPSPSST PPLLLQPHSF VSSGGASEAA SAVPGIAMMG GAFGYDELAA AADGFSESNL
301: LGQGGFGQVY KGTVRGQEVA IKKLRSGSGQ GEREFQAEVE IISRVHHKNL VSLVGYCIYG EQRLLVYEYV PNKTLEFHLH GSGRPALDWP RRWKIAVGSA
401: KGLAYLHEDC HPKIIHRDIK AANILLDYTF EPKVADFGLA KYQATEQTAV STRVMGTFGY LAPEYAATGK VNDRSDVFSF GVMLLELITG KKPIMVSHGD
501: QPDTLVSWAR PLLVRAVEEE NFEELVDPRL ENNYDAYDMG RLIACAAAAV RHTARSRPRM SQIVRYLEGE LAAEDLNAGV TPGQSAMQRT SGGTTDQMKR
601: LRKMAFGSAT GTGTVSEYTS SEFSEPTSEY GLNPSTEYTT SAAGGDTGEV TVDVQMTAGA SGEAAGTERL SRRTTARRGG RV
Best Arabidopsis Sequence Match ( AT4G34440.2 )
(BLAST)
001: MADSPVDSSP APETSNGTPP SNGTSPSNES SPPTPPSSPP PSSISAPPPD ISASFSPPPA PPTQETSPPT SPSSSPPVVA NPSPQTPENP SPPAPEGSTP
101: VTPPAPPQTP SNQSPERPTP PSPGANDDRN RTNGGNNNRD GSTPSPPSSG NRTSGDGGSP SPPRSISPPQ NSGDSDSSSG NHPQANIGLI IGVLVGAGLL
201: LLLAVCICIC CNRKKKKKSP QVNHMHYYNN NPYGGAPSGN GGYYKGTPQD HVVNMAGQGG GNWGPQQPVS GPHSDASNLT GRTAIPSPQA ATLGHNQSTF
301: TYDELSIATE GFAQSNLLGQ GGFGYVHKGV LPSGKEVAVK SLKLGSGQGE REFQAEVDII SRVHHRHLVS LVGYCISGGQ RLLVYEFIPN NTLEFHLHGK
401: GRPVLDWPTR VKIALGSARG LAYLHEDCHP RIIHRDIKAA NILLDFSFET KVADFGLAKL SQDNYTHVST RVMGTFGYLA PEYASSGKLS DKSDVFSFGV
501: MLLELITGRP PLDLTGEMED SLVDWARPLC LKAAQDGDYN QLADPRLELN YSHQEMVQMA SCAAAAIRHS ARRRPKMSQI VRALEGDMSM DDLSEGTRPG
601: QSTYLSPGSV SSEYDASSYT ADMKKFKKLA LENKEYQSSE YGGTSEYGLN PSASSSEEMN RGSMKRNPQL
Arabidopsis Description
PERK5PERK5 [Source:UniProtKB/TrEMBL;Acc:A0A178V2W8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.