Factsheet for TraesCS3D01G290100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012743_P002	Maize	cytosol	62.79	67.07
TraesCS1D01G339600.1	Wheat	plastid	60.5	58.76
TraesCS3A01G290300.2	Wheat	plastid	98.63	55.24
HORVU3Hr1G071830.1	Barley	mitochondrion	93.84	54.29
TraesCS3B01G325100.2	Wheat	plastid	96.8	52.28
TraesCS3D01G005400.1	Wheat	cytosol	45.43	49.63
KXG33373	Sorghum	plastid	78.54	48.38
Os01t0750600-01	Rice	plasma membrane	72.6	46.63
Zm00001d043480_P001	Maize	plastid	77.63	46.26
TraesCS1D01G126300.1	Wheat	plastid	51.6	34.61
TraesCS3D01G160000.1	Wheat	plastid	49.09	34.02
GSMUA_Achr3P15710_001	Banana	plastid	51.83	31.1
TraesCS1D01G004300.1	Wheat	plastid	43.61	29.12
TraesCS3D01G278400.1	Wheat	cytosol, plastid	41.78	27.07
TraesCS7D01G232700.1	Wheat	nucleus, plastid	42.47	24.77
TraesCS3D01G217700.1	Wheat	cytosol, nucleus, peroxisome	33.79	19.58
TraesCS3D01G402800.1	Wheat	mitochondrion	28.77	18.29
TraesCS1D01G442500.1	Wheat	plastid	34.02	16.8

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF106	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS3D01G290100	EnsemblPlants:TraesCS3D01G290100.1	TIGR:cd14066	SEG:seg

Description

No Description!

Coordinates

chr3D:-:400311179..400313252

Molecular Weight (calculated)

47145.3 Da

IEP (calculated)

6.724

GRAVY (calculated)

-0.447

Length

438 amino acids

Sequence
(BLAST)

001: MHSWAQSSGG GDPGGPPLPA MTGGTLGYDE LAAAADGFSE ANLLGQGGFG HVYKGTVNGQ EVAIKKLRAG SGQGHREFRA EVDIISRVHH KNLVSLVGFC
101: IHAEQRLLVY EYVPNKTLES HLHHVSGSGR ATLDWPRRWK IAVGSAKGLA YLHEDCHPKI IHRDIKAANI LLDYNYEPKV ADFGLAKCQE AEHTAVSTRV
201: MGTFGYLAPE YYATGKVTDR SDVYSFGVML LELITGRKPI MASSDHQPET LATWAKPLLT KALEEENYEE LIDPELGTNY DAYDMARLVA CAAAAVRQTA
301: RSRPRMAQIV RYLEGELSAE DLNGGMAPGQ SAMHRSGGGN TDEVRRLRRM AFGPGTGTAG GTISEYASSE MSARTSEYGL NPSSEYTASS AADTEDMTDF
401: PHRAGTGRGA AEGVSGEAGR GTTEGFSRRT TVRRTGRG

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.