Factsheet for TraesCS3D01G160000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G179300.1	Wheat	plastid	97.31	97.46
TraesCS3A01G152200.1	Wheat	plastid	96.99	97.3
HORVU3Hr1G030900.1	Barley	plastid	95.25	95.71
GSMUA_Achr5P06880_001	Banana	plastid	49.21	75.12
OQU86081	Sorghum	plastid	73.1	74.52
Os01t0227200-01	Rice	plasma membrane	69.46	73.53
Zm00001d039311_P001	Maize	mitochondrion	71.36	72.74
GSMUA_Achr8P19800_001	Banana	cytosol	45.73	70.15
GSMUA_Achr10P...	Banana	plastid	53.16	68.57
GSMUA_Achr7P14360_001	Banana	plastid	55.85	65.13
TraesCS1D01G126300.1	Wheat	plastid	65.51	63.4
KRH48383	Soybean	mitochondrion	63.45	59.76
KRH39292	Soybean	plastid	62.03	59.04
VIT_11s0016g03880.t01	Wine grape	plastid	60.6	58.92
VIT_09s0002g04210.t01	Wine grape	plastid	49.37	56.62
CDY39543	Canola	plastid	57.75	56.24
Bra015053.1-P	Field mustard	plastid	57.12	56.06
TraesCS3D01G005400.1	Wheat	cytosol	35.44	55.86
Solyc12g007110.1.1	Tomato	nucleus	60.44	55.77
CDX77417	Canola	plastid	56.96	55.38
PGSC0003DMT400001024	Potato	plastid	60.76	55.09
AT3G24550.1	Thale cress	plastid	56.8	55.06
GSMUA_Achr10P...	Banana	cytosol	51.11	53.83
AT3G24540.1	Thale cress	cytosol	40.66	53.65
AT1G52290.1	Thale cress	plastid	42.88	53.24
CDY02546	Canola	plastid	43.04	53.02
CDY47531	Canola	plastid	43.04	52.61
Bra014321.1-P	Field mustard	plastid	42.88	52.42
KRH47030	Soybean	nucleus, plastid	46.2	51.23
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	46.36	50.43
PGSC0003DMT400006515	Potato	plastid	46.52	50.0
TraesCS3D01G290100.1	Wheat	cytosol	34.02	49.09
Bra038894.1-P	Field mustard	cytosol	12.82	48.8
TraesCS1D01G339600.1	Wheat	plastid	34.81	48.78
Bra028371.1-P	Field mustard	plastid	49.53	47.42
Bra021251.1-P	Field mustard	cytosol	7.59	43.24
KRH47029	Soybean	plastid	37.34	42.75
CDY48706	Canola	cytosol	35.44	42.42
TraesCS1D01G004300.1	Wheat	plastid	39.4	37.96
TraesCS3D01G278400.1	Wheat	cytosol, plastid	40.51	37.87
TraesCS7D01G232700.1	Wheat	nucleus, plastid	40.51	34.09
CDY46900	Canola	plasma membrane	33.86	28.96
Bra021250.1-P	Field mustard	plasma membrane	37.97	26.37
TraesCS3D01G217700.1	Wheat	cytosol, nucleus, peroxisome	27.69	23.15
Bra035231.1-P	Field mustard	plasma membrane	29.75	22.27
TraesCS1D01G442500.1	Wheat	plastid	28.48	20.29
TraesCS3D01G402800.1	Wheat	mitochondrion	20.73	19.01
Bra021253.1-P	Field mustard	plasma membrane	29.59	16.55
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	9.49	15.46

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G160000	EnsemblPlants:TraesCS3D01G160000.1	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:130927305..130931686

Molecular Weight (calculated)

67496.4 Da

IEP (calculated)

7.193

GRAVY (calculated)

-0.556

Length

632 amino acids

Sequence
(BLAST)

001: MSSSPPAAPG PASPPGNRTA PPPASAPPAT NSTPPSPPAP PASAPPPSSP VPPPSTPAAP PPSSGTTPAT PSLPPPTAPG APAAPSPPST TPSPPTDRPT
101: PSAQASPPPP SSALNTATVA GIAVGGLIAL LLASLLCFCM LKKKRRHHPH HPPPPPPPHH LHYYGHPPPP PPPPPFKGDQ YGWQHNAPPP PPDHVVKMNS
201: HPSTKLPPPP VNVNSSGSGS HFSGGGENRP LQSPFGNALS FSKCTFTYEE LAVATNEFSD ANLLGQGGFG FVHKGVLPDG TEVAVKQLRD GSGQGEREFQ
301: AEVEIISRVH HKHLVTLVGY CISEDKRLLV YEFVPNNTLE FHIHGRRGPT MDWPSRLRIA LGSAKGLAYL HEDCHPKIIH RDIKASNILL DYRCEAKVAD
401: FGLAKLTSDN NTHVSTRVMG TFGYLAPEYA SSGKLTEKSD VFSFGVMLLE LITGRRPVSS KQAHMDDSLV DWARPLMTQA LEDGNHDALV DPHLGIDFND
501: NEMARMIACA AACVRHSARR RPRMSQVVRA LEGDVSLDDL HEGVRPGHSR FMGSHASSEY DTSQYNEDLK KFRKMALGTS SFQSSQLTPS SGEHEHQEPS
601: VPSSDGHQQT QEVELGTRKR DDGDVESQAS MR

Best Arabidopsis Sequence Match ( AT2G18470.1 )
(BLAST)

001: MASSPESAPP TNSTSSPSPP SNTNSTTSSP PAPSPPSPTP PQGDSSSSPP PDSTSPPAPQ APNPPNSSNN SPSPPSQGGG GERGNGGNNG GNDTPPSRGS
101: PPSPPSRSNG DNGGSRSSPP GDTGGSRSDN PPSSGGSSGG GGGGRSNTNT AIIVGVLVGA GLLMIVLIIV CLRRKKKRKD SFYPEPMKGN QYQYYGNNNN
201: NNASQNYPNW HLNSQGQNQQ STGGWGGGGP SPPPPPRMPT SGEDSSMYSG PSRPVLPPPS PALALGFNKS TFTYQELAAA TGGFTDANLL GQGGFGYVHK
301: GVLPSGKEVA VKSLKAGSGQ GEREFQAEVD IISRVHHRYL VSLVGYCIAD GQRMLVYEFV PNKTLEYHLH GKNLPVMEFS TRLRIALGAA KGLAYLHEDC
401: HPRIIHRDIK SANILLDFNF DAMVADFGLA KLTSDNNTHV STRVMGTFGY LAPEYASSGK LTEKSDVFSY GVMLLELITG KRPVDNSITM DDTLVDWARP
501: LMARALEDGN FNELADARLE GNYNPQEMAR MVTCAAASIR HSGRKRPKMS QIVRALEGEV SLDALNEGVK PGHSNVYGSL GASSDYSQTS YNADMKKFRQ
601: IALSSQEFPV SDCEGTSSND SRDMGTKSPT PPK

Arabidopsis Description

PERK4Proline-rich receptor-like protein kinase PERK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.