Factsheet for GSMUA_Achr8P19800_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06880_001	Banana	plastid	75.49	75.12
GSMUA_Achr10P...	Banana	plastid	76.21	64.08
GSMUA_Achr7P26790_001	Banana	plastid	60.68	57.34
GSMUA_Achr10P...	Banana	cytosol	79.85	54.83
GSMUA_Achr7P14360_001	Banana	plastid	71.36	54.24
GSMUA_Achr8P29720_001	Banana	mitochondrion	51.46	53.13
EES19240	Sorghum	cytosol, plasma membrane, plastid	74.76	52.92
Bra038894.1-P	Field mustard	cytosol	20.87	51.81
HORVU1Hr1G030140.2	Barley	plastid	75.49	51.07
VIT_09s0002g04210.t01	Wine grape	plastid	67.48	50.45
CDY02546	Canola	plastid	61.89	49.71
AT1G52290.1	Thale cress	plastid	61.16	49.51
CDY47531	Canola	plastid	61.89	49.32
Bra014321.1-P	Field mustard	plastid	61.65	49.13
Zm00001d037811_P001	Maize	plasma membrane	58.98	49.09
TraesCS1D01G126300.1	Wheat	plastid	75.73	47.78
Os01t0227200-01	Rice	plasma membrane	69.17	47.74
TraesCS1A01G127900.1	Wheat	plastid	75.97	47.57
VIT_11s0016g03880.t01	Wine grape	plastid	75.0	47.54
AT3G24540.1	Thale cress	cytosol	55.1	47.39
OQU86081	Sorghum	plastid	70.63	46.94
KRH47030	Soybean	nucleus, plastid	63.84	46.14
TraesCS1B01G147000.2	Wheat	plastid	68.93	46.03
TraesCS3B01G179300.1	Wheat	plastid	70.39	45.96
Bra021251.1-P	Field mustard	cytosol	12.38	45.95
Os05t0218400-01	Rice	plasma membrane	75.24	45.93
TraesCS3A01G152200.1	Wheat	plastid	70.15	45.87
Zm00001d039311_P001	Maize	mitochondrion	68.93	45.81
TraesCS3D01G160000.1	Wheat	plastid	70.15	45.73
HORVU3Hr1G030900.1	Barley	plastid	69.66	45.63
GSMUA_Achr1P25240_001	Banana	mitochondrion	52.91	45.51
Bra015053.1-P	Field mustard	plastid	71.12	45.5
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	63.84	45.27
CDY39543	Canola	plastid	71.12	45.15
CDX77417	Canola	plastid	71.12	45.08
PGSC0003DMT400006515	Potato	plastid	64.32	45.07
Zm00001d010421_P002	Maize	plasma membrane	74.27	45.07
KRH48383	Soybean	mitochondrion	73.06	44.86
KRH39292	Soybean	plastid	72.09	44.73
AT3G24550.1	Thale cress	plastid	70.63	44.63
GSMUA_Achr5P02090_001	Banana	nucleus	63.35	44.39
GSMUA_Achr7P14330_001	Banana	plasma membrane	46.84	44.16
GSMUA_Achr10P...	Banana	plastid	58.74	44.0
GSMUA_Achr4P10790_001	Banana	plastid	66.5	43.01
GSMUA_Achr7P14350_001	Banana	plasma membrane	46.84	42.51
Solyc12g007110.1.1	Tomato	nucleus	70.39	42.34
CDY48706	Canola	cytosol	54.13	42.23
GSMUA_Achr7P00830_001	Banana	plastid	62.86	42.18
PGSC0003DMT400001024	Potato	plastid	71.12	42.04
GSMUA_Achr4P32080_001	Banana	plastid	61.89	41.4
GSMUA_Achr4P03200_001	Banana	mitochondrion, plasma membrane	64.81	39.32
KRH47029	Soybean	plastid	52.67	39.31
Bra028371.1-P	Field mustard	plastid	62.62	39.09
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	44.42	35.06
GSMUA_Achr2P09600_001	Banana	plastid	52.43	32.88
GSMUA_Achr3P15710_001	Banana	plastid	56.8	32.05
GSMUA_Achr2P14510_001	Banana	plastid	50.97	31.96
GSMUA_Achr4P24400_001	Banana	plastid	50.73	31.62
GSMUA_Achr1P13940_001	Banana	plastid	53.64	31.3
GSMUA_Achr10P...	Banana	plastid	50.0	28.73
CDY46900	Canola	plasma membrane	47.82	26.66
Bra021250.1-P	Field mustard	plasma membrane	53.64	24.29
GSMUA_Achr6P18630_001	Banana	cytosol, nucleus, plasma membrane	29.85	22.91
GSMUA_Achr1P04890_001	Banana	cytosol	38.59	22.43
GSMUA_Achr6P26510_001	Banana	cytosol	38.84	22.35
GSMUA_Achr9P05910_001	Banana	plasma membrane	38.11	21.3
Bra035231.1-P	Field mustard	plasma membrane	41.02	20.02
GSMUA_Achr8P13750_001	Banana	cytosol, nucleus, plastid	41.75	19.61
GSMUA_Achr8P04820_001	Banana	cytosol, plasma membrane, plastid	34.47	18.81
GSMUA_Achr5P07770_001	Banana	cytosol	32.77	17.95
Bra021253.1-P	Field mustard	plasma membrane	41.02	14.96
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	10.19	10.82

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr8G19800_001	EnsemblPlants:GSMUA_Achr8P19800_001	EnsemblPlants:GSMUA_Achr8T19800_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TRY3
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF89	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294D3DD	SEG:seg	:	:	:

Description

retrotransposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G19800_001]

Coordinates

chr8:-:24946997..24949853

Molecular Weight (calculated)

45030.1 Da

IEP (calculated)

6.280

GRAVY (calculated)

-0.444

Length

412 amino acids

Sequence
(BLAST)

001: MISSSGGLGS NNSGAEDPPT PSPGVALGFS KSTFTYEELA MATDDFSDAN LLGQGGFGYV HRGALADGKE VAIKQLKPGS GQGEREFQAE VEIISRVHHK
101: HLVSLVGYCI SGGKRLLVYE FVPNNTLGFH LHGKGQPTME WSIRLRIALG SAKGLAYLHE DCHPKIIHRD IKASNILLDY KYEAKVADFG LAKFASDTDT
201: HISTRVMGTF GYLAPEYASS GKLTDKSDVF SFGVMLLELI TGRRPIDSSQ TFTDESLVDW ARPLLARALD DGNYDALVDP RLGKKYNLSE MARMVSCAAA
301: CVRHSARRRP RMSQIARALE GDTCLEDLNE GIRPGHSMYH TSYGSSDYDS GQYSEDIREF RKMVMGTEEN ATGESIMPTA EYAQNPSTSS SEGRHTQEIE
401: MGKKKDVSEK GG

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.