CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015053.1-P	Field mustard	plastid	97.69	98.45
CDX77417	Canola	plastid	97.38	97.23
AT3G24550.1	Thale cress	plastid	88.29	87.88
GSMUA_Achr5P06880_001	Banana	plastid	47.92	75.12
GSMUA_Achr8P19800_001	Banana	cytosol	45.15	71.12
GSMUA_Achr10P...	Banana	plastid	52.08	68.98
GSMUA_Achr7P14360_001	Banana	plastid	54.39	65.13
HORVU1Hr1G030140.2	Barley	plastid	60.86	64.86
EES19240	Sorghum	cytosol, plasma membrane, plastid	57.47	64.09
TraesCS1D01G126300.1	Wheat	plastid	64.25	63.86
CDX75275	Canola	cytosol	34.36	63.35
TraesCS1A01G127900.1	Wheat	plastid	64.1	63.22
TraesCS1B01G147000.2	Wheat	plastid	59.48	62.56
CDX92276	Canola	plasma membrane	45.76	61.88
OQU86081	Sorghum	plastid	58.55	61.29
Os05t0218400-01	Rice	plasma membrane	63.48	61.04
Zm00001d010421_P002	Maize	plasma membrane	63.33	60.53
Os01t0227200-01	Rice	plasma membrane	54.7	59.46
Zm00001d039311_P001	Maize	mitochondrion	56.55	59.19
HORVU3Hr1G030900.1	Barley	plastid	56.39	58.19
TraesCS3B01G179300.1	Wheat	plastid	56.39	58.0
TraesCS3A01G152200.1	Wheat	plastid	56.24	57.94
TraesCS3D01G160000.1	Wheat	plastid	56.24	57.75
GSMUA_Achr10P...	Banana	cytosol	52.7	57.0
CDY02546	Canola	plastid	44.99	56.92
CDY47531	Canola	plastid	44.99	56.48
Zm00001d037811_P001	Maize	plasma membrane	42.37	55.56
CDY65603	Canola	plastid	49.61	52.1
CDY46249	Canola	nucleus, plastid	51.31	50.15
CDX76282	Canola	nucleus, plastid	51.0	50.08
CDX75434	Canola	nucleus, plastid	51.77	50.0
CDY71995	Canola	nucleus, plastid	32.67	49.53
CDX95494	Canola	nucleus, plastid	51.93	49.13
CDY48859	Canola	nucleus, plastid	51.46	48.76
CDY59546	Canola	plastid	32.67	48.62
CDY18547	Canola	nucleus, plastid	51.31	48.61
CDY48084	Canola	nucleus, plastid	51.31	48.54
CDX99312	Canola	nucleus, plastid	47.92	47.48
CDY61983	Canola	cytosol, plastid	50.69	47.2
CDX69059	Canola	endoplasmic reticulum, plasma membrane	51.16	46.5
CDX82325	Canola	cytosol, plastid	50.54	46.0
CDY48706	Canola	cytosol	35.59	43.75
CDX68882	Canola	plastid	46.69	43.1
CDY01653	Canola	plastid	43.61	43.07
CDX74517	Canola	plastid	43.91	42.92
CDY41442	Canola	plastid	43.14	42.49
CDX91719	Canola	plastid	43.76	42.14
CDY03749	Canola	plastid	42.99	41.52
CDY09439	Canola	plastid	42.99	40.85
CDY59350	Canola	plastid	41.6	40.72
CDY44156	Canola	nucleus	43.3	39.47
CDY04245	Canola	plastid	40.52	38.73
CDY51639	Canola	nucleus	41.76	38.6
CDY07370	Canola	plastid	39.6	38.59
CDY11592	Canola	plastid	43.45	38.37
CDY47133	Canola	cytosol, plastid	43.61	37.63
CDX93398	Canola	cytosol	41.29	37.48
CDY37963	Canola	cytosol	40.99	36.89
CDX95997	Canola	plastid	41.29	36.51
CDY66134	Canola	nucleus	50.69	35.76
CDY20960	Canola	cytosol	40.06	35.71
CDY51224	Canola	plastid	51.93	35.62
CDY20615	Canola	cytosol	39.6	35.35
CDY16146	Canola	plastid	43.76	33.93
CDY38610	Canola	plastid	41.91	30.87
CDY46900	Canola	plasma membrane	33.59	29.5
CDY10586	Canola	cytosol, nucleus, plasma membrane	26.81	28.81
CDY02454	Canola	cytosol, nucleus, plasma membrane	26.66	28.64
CDX75728	Canola	cytosol	26.35	28.5
CDX82522	Canola	cytosol	27.58	27.25
CDY20711	Canola	cytosol, plasma membrane, plastid	26.35	25.83
CDY32758	Canola	plasma membrane	26.35	25.71
CDY23630	Canola	cytosol	28.35	24.83
CDX97507	Canola	cytosol, mitochondrion, nucleus	28.35	24.63
CDY55134	Canola	cytosol	27.89	24.07
CDY51732	Canola	cytosol	27.89	24.07
CDY32884	Canola	plasma membrane	22.8	23.95
CDY32921	Canola	plasma membrane	24.04	20.8
CDY32757	Canola	plasma membrane	19.72	18.05
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	10.32	17.27

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078HS27	UniProt:A0A078HS27	EnsemblPlants:CDY39543
ProteinID:CDY39543	ProteinID:CDY39543.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00068078001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF89
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EECA26	SEG:seg	:	:	:

Description

BnaC07g07110DBnaC07g07110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS27]

Coordinates

chrLK032451:-:59587..62564

Molecular Weight (calculated)

68675.8 Da

IEP (calculated)

8.499

GRAVY (calculated)

-0.571

Length

649 amino acids

Sequence
(BLAST)

001: MSSAPSPGTG SPPSPPSNST TTTPPPASAP PPTTPSSPPP PSTIPTSPPP SSPSTPSAPP SSPPTPSTPG SPPPLPQPSP PAPTTPGSPP APVTPPTRNP
101: PPSVPGPPSN PSREGGSPRP PSSPSPPSPS SDGLSTGVVV GIAIGGVALL VIVTLICLLC KKKRRRDEED AYYVPPPPPP GPKAGGPYGG QQQQWRQQNA
201: TPPSDHVVTS LPPPPPKAPS PPRQPPPPPP PPFMSSSGGS DYSDRPVLPP PSPGLVLGFS KSTFTYEELA RATNGFSEAN LLGQGGFGYV HKGVLPSGKE
301: VAVKQLKVGS GQGEREFQAE VEIISRVHHR HLVSLVGYCI AGAKRLLVYE FVPNNNLEFH LHGEGRPTME WSTRLKIALG SAKGLSYLHE DCNPKIIHRD
401: IKASNILIDF KFEAKVADFG LAKIASDTNT HVSTRVMGTF GYLAPEYAAS GKLTEKSDVF SFGVVLLELI TGRRPVDANN VYVDDSLVDW ARPLLNRASE
501: QGDFEGLADA KMNNGYDREE MARMVACAAA CVRHSARRRP RMSQQIVRAL EGNVSLSDLN EGMRPGQSNV YSSYGGSTDY DSSQYNEDMK KFRKMALGTQ
601: EYNATGEYSN PTSDYGLYPS GSSSEGQTTR EMEMGKIKRT GQGYSGPSL

Best Arabidopsis Sequence Match ( AT3G24550.1 )
(BLAST)

001: MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR
101: SPPSPNQGPP NTPSGSTPRT PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP PPPSGPKAGG PYGGQQQYWQ
201: QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP
301: SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI
401: IHRDIKASNI LIDFKFEAKV ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV DANNVYVDDS LVDWARPLLN
501: RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL
601: GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

Arabidopsis Description

PERK1Proline-rich receptor-like protein kinase PERK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.