CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016342.1-P	Field mustard	plastid	98.94	98.94
CDX91719	Canola	plastid	96.97	94.81
CDY44156	Canola	nucleus	84.98	78.65
CDY51639	Canola	nucleus	82.85	77.78
AT1G23540.1	Thale cress	nucleus, plastid	84.52	77.36
CDY03749	Canola	plastid	70.11	68.75
CDY09439	Canola	plastid	70.71	68.23
CDY11592	Canola	plastid	68.89	61.77
CDY47133	Canola	cytosol, plastid	68.44	59.97
CDX75275	Canola	cytosol	29.74	55.68
VIT_01s0127g00670.t01	Wine grape	plastid	56.45	55.36
KRG99346	Soybean	plastid	48.56	51.45
GSMUA_Achr6P27340_001	Banana	cytosol, endoplasmic reticulum, plastid	38.54	48.66
KRH69571	Soybean	nucleus, plastid	49.77	48.24
CDX92276	Canola	plasma membrane	35.05	48.12
KRH74591	Soybean	nucleus, plastid	49.62	47.67
CDY37963	Canola	cytosol	51.44	47.02
CDX93398	Canola	cytosol	50.99	46.99
CDY20960	Canola	cytosol	50.83	46.02
CDY20615	Canola	cytosol	50.68	45.94
GSMUA_Achr1P13940_001	Banana	plastid	48.71	45.47
KRH45666	Soybean	cytosol, nucleus, plastid	49.32	45.26
CDY02546	Canola	plastid	35.2	45.22
CDY04245	Canola	plastid	46.28	44.92
CDY47531	Canola	plastid	35.05	44.68
CDY07370	Canola	plastid	44.92	44.44
CDY01653	Canola	plastid	44.16	44.29
CDX74517	Canola	plastid	44.46	44.13
Os03t0568800-01	Rice	cytosol, nucleus, plastid	45.07	44.0
HORVU3Hr1G057190.2	Barley	plastid	45.83	43.45
Zm00001d011450_P001	Maize	plastid	44.92	43.34
CDY39543	Canola	plastid	42.49	43.14
CDX77417	Canola	plastid	42.34	42.92
CDY59350	Canola	plastid	43.1	42.84
TraesCS3B01G259100.1	Wheat	cytosol, plastid	44.92	42.41
TraesCS3A01G229800.1	Wheat	plastid	46.13	42.22
KXG32962	Sorghum	plastid	44.31	41.77
Os06t0486000-01	Rice	plasma membrane	47.34	41.71
CDX95997	Canola	plastid	45.37	40.74
TraesCS7B01G131000.1	Wheat	nucleus, plastid	46.13	40.37
TraesCS7D01G232700.1	Wheat	nucleus, plastid	45.98	40.35
CDY65603	Canola	plastid	37.78	40.29
CDX76282	Canola	nucleus, plastid	40.36	40.24
CDY46249	Canola	nucleus, plastid	40.36	40.06
CDX75434	Canola	nucleus, plastid	40.36	39.58
CDX95494	Canola	nucleus, plastid	41.12	39.5
CDY18547	Canola	nucleus, plastid	40.82	39.27
CDY59546	Canola	plastid	25.8	38.99
CDY71995	Canola	nucleus, plastid	25.04	38.55
CDY48859	Canola	nucleus, plastid	40.06	38.54
CDY48084	Canola	nucleus, plastid	40.06	38.48
CDY48706	Canola	cytosol	30.8	38.45
Zm00001d037066_P008	Maize	plastid	43.85	38.33
CDY61983	Canola	cytosol, plastid	40.52	38.31
CDX99312	Canola	nucleus, plastid	37.94	38.17
CDX82325	Canola	cytosol, plastid	40.36	37.31
CDX69059	Canola	endoplasmic reticulum, plasma membrane	39.76	36.69
CDY16146	Canola	plastid	46.43	36.56
CDX68882	Canola	plastid	38.39	35.99
CDY38610	Canola	plastid	46.59	34.85
CDX75728	Canola	cytosol	27.77	30.5
CDY02454	Canola	cytosol, nucleus, plasma membrane	26.56	28.97
CDY10586	Canola	cytosol, nucleus, plasma membrane	26.56	28.97
CDX82522	Canola	cytosol	28.53	28.61
CDY46900	Canola	plasma membrane	31.41	28.01
HORVU7Hr1G047750.6	Barley	plastid	33.38	27.92
CDY66134	Canola	nucleus	38.39	27.5
CDY32758	Canola	plasma membrane	27.01	26.77
CDY51224	Canola	plastid	38.39	26.74
CDY20711	Canola	cytosol, plasma membrane, plastid	26.25	26.13
CDY23630	Canola	cytosol	29.14	25.91
CDX97507	Canola	cytosol, mitochondrion, nucleus	28.98	25.57
CDY51732	Canola	cytosol	29.14	25.53
CDY55134	Canola	cytosol	29.14	25.53
CDY32884	Canola	plasma membrane	23.37	24.92
CDY32921	Canola	plasma membrane	23.82	20.93
CDY32757	Canola	plasma membrane	19.58	18.19
CDY48704	Canola	cytosol, mitochondrion, plasma membrane, plastid	8.65	14.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.22	Gene3D:3.30.200.20	GO:A0A078HUB4	UniProt:A0A078HUB4	EnsemblPlants:CDY41442
ProteinID:CDY41442	ProteinID:CDY41442.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00073042001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR01167	TMHMM:TMhelix
UniParc:UPI0004EED681	SEG:seg	:	:	:	:

Description

BnaA08g20440DBnaA08g20440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUB4]

Coordinates

chrLK032498:+:42929..45687

Molecular Weight (calculated)

70570.1 Da

IEP (calculated)

6.177

GRAVY (calculated)

-0.634

Length

659 amino acids

Sequence
(BLAST)

001: MSDSGGSPAS SPPAPPADSA PPPETSPPPP SDSSPPPPSD PQPSPPPPDS LLPPLPSLLP PLTATPPPAS NPPPADSTNS PPPTSTETPS PPPPANSDAP
101: PNESNNPPPS PDVQSPPPPP SSPSTNPETP PPESPPAPPS DPTNSPPIQP SPPAYSPPPS SLLAPHKPNG GSGRPVGSPS VPSRETPPTN SSNGNQTMVG
201: MAVAGVAIMA LIAIVFFVRR KKKKNIDAYA HSQYLPQPNF SVKSDGFLYG QDPSKVYSGP GGSMYNSQQQ YSSMGNSYGS QRGQSNDSAI LGTGQTHFSY
301: EELAEITQGF SRHNILGEGG FGCVYKGTLH DGKVVAVKQL KAGSGQGDRE FKAEVEIISR VHHRHLVSLV GYCISDQHRL LIYEYVSNQT LEHHLHGRGR
401: PVLEWSKRVR IAIGSAKGLA YLHEDCHPKI IHRDIKSANI LLDDEYEAQV ADFGLARLND TTQTHVSTRV MGTFGYLAPE YASSGKLTDR SDVFSFGVVL
501: LELVTGRKPV DQNQPLGEES LVEWARPLLL KAIETGDFSE LIDRRLEKHY VEHEVFRMIE TAAACVRHSG PKRPRMVQVV RALDCDEDSG DISNGIKVGQ
601: STTYNSGQYN QDITKFRKMA FGSGDSGEAG MYSGDHSVIS SSDFSGNESE TRPFNNRRF

Best Arabidopsis Sequence Match ( AT1G70460.1 )
(BLAST)

001: MSDSPTSSPP APSADSAPPP DTSSDGSAAP PPTDSAPPPS PPADSSPPPA LPSLPPAVFS PPPTVSSPPP PPLDSSPPPP PDLTPPPSSP PPPDAPPPIP
101: IVFPPPIDSP PPESTNSPPP PEVFEPPPPP ADEDESPPAP PPPEQLPPPA SSPQGGPKKP KKHHPGPATS PPAPSAPATS PPAPPNAPPR NSSHALPPKS
201: TAAGGPLTSP SRGVPSSGNS VPPPANSGGG YQGKTMAGFA IAGFAVIALM AVVFLVRRKK KRNIDAYSDS QYLPPSNFSI KSDGFLYGQN PTKGYSGPGG
301: YNSQQQSNSG NSFGSQRGGG GYTRSGSAPD SAVMGSGQTH FTYEELTDIT EGFSKHNILG EGGFGCVYKG KLNDGKLVAV KQLKVGSGQG DREFKAEVEI
401: ISRVHHRHLV SLVGYCIADS ERLLIYEYVP NQTLEHHLHG KGRPVLEWAR RVRIAIGSAK GLAYLHEDCH PKIIHRDIKS ANILLDDEFE AQVADFGLAK
501: LNDSTQTHVS TRVMGTFGYL APEYAQSGKL TDRSDVFSFG VVLLELITGR KPVDQYQPLG EESLVEWARP LLHKAIETGD FSELVDRRLE KHYVENEVFR
601: MIETAAACVR HSGPKRPRMV QVVRALDSEG DMGDISNGNK VGQSSAYDSG QYNNDTMKFR KMAFGFDDSS DSGMYSGDYS VQDSRKGSNG ASSEFTRNET
701: ENRNFNNRRY

Arabidopsis Description

PERK13RHS10 [Source:UniProtKB/TrEMBL;Acc:A0A178WB53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.