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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY20711 Canola cytosol, plasma membrane, plastid 47.73 54.08
CDY32758 Canola plasma membrane 47.6 53.68
AT5G56790.1 Thale cress cytosol, plasma membrane, plastid 47.6 53.36
CDY32884 Canola plasma membrane 40.0 48.54
CDY10586 Canola cytosol, nucleus, plasma membrane 35.6 44.21
CDX75728 Canola cytosol 35.33 44.17
CDY02454 Canola cytosol, nucleus, plasma membrane 35.33 43.87
KRH41431 Soybean cytosol, nucleus, plasma membrane 37.6 41.9
CDX82522 Canola cytosol 35.87 40.94
CDX75275 Canola cytosol 19.2 40.91
KRH60141 Soybean cytosol 37.47 40.14
VIT_11s0016g02430.t01 Wine grape plasma membrane 38.67 38.51
EES18801 Sorghum cytosol 36.93 37.95
TraesCS3A01G216100.1 Wheat mitochondrion, plasma membrane 37.6 37.7
Os01t0602800-01 Rice cytosol, mitochondrion, nucleus, plasma membrane 37.6 37.65
TraesCS3B01G245800.1 Wheat mitochondrion, plasma membrane 37.6 37.65
EES01025 Sorghum plasma membrane 37.33 37.38
CDY23630 Canola cytosol 36.93 37.38
TraesCS3D01G217700.1 Wheat cytosol, nucleus, peroxisome 37.6 37.3
Zm00001d011288_P006 Maize plasma membrane, plastid 37.2 37.3
Zm00001d039176_P001 Maize cytosol, nucleus, plasma membrane 35.87 37.1
CDX97507 Canola cytosol, mitochondrion, nucleus 36.93 37.08
CDY51732 Canola cytosol 36.53 36.44
CDY55134 Canola cytosol 36.4 36.3
Zm00001d044405_P003 Maize mitochondrion, plasma membrane 37.33 36.22
CDY32757 Canola plasma membrane 31.6 33.43
TraesCS1D01G442500.1 Wheat plastid 36.8 31.12
TraesCS1B01G468900.1 Wheat plastid 37.07 30.96
CDX92276 Canola plasma membrane 19.07 29.79
Bra002791.1-P Field mustard plasma membrane 47.47 29.42
TraesCS1A01G433100.1 Wheat cytosol, plastid 36.93 28.88
HORVU1Hr1G094090.1 Barley cytosol, plastid 36.13 28.26
Os05t0589700-01 Rice cytosol, nucleus, plasma membrane 16.93 26.02
CDY02546 Canola plastid 17.73 25.93
CDY47531 Canola plastid 17.6 25.53
CDY48706 Canola cytosol 17.2 24.43
CDY59350 Canola plastid 21.33 24.13
CDY39543 Canola plastid 20.8 24.04
CDX77417 Canola plastid 20.67 23.85
CDY41442 Canola plastid 20.93 23.82
CDY03749 Canola plastid 21.33 23.81
CDY07370 Canola plastid 21.07 23.72
CDX74517 Canola plastid 20.8 23.49
CDX76282 Canola nucleus, plastid 20.67 23.45
CDY01653 Canola plastid 20.53 23.44
CDY46249 Canola nucleus, plastid 20.67 23.34
CDY09439 Canola plastid 21.2 23.28
CDY04245 Canola plastid 20.93 23.12
CDX75434 Canola nucleus, plastid 20.67 23.07
CDX91719 Canola plastid 20.67 23.0
CDX99312 Canola nucleus, plastid 20.0 22.9
CDY48859 Canola nucleus, plastid 20.8 22.77
CDX95494 Canola nucleus, plastid 20.67 22.59
CDY48084 Canola nucleus, plastid 20.67 22.59
CDY18547 Canola nucleus, plastid 20.53 22.48
CDY44156 Canola nucleus 21.2 22.33
CDY65603 Canola plastid 18.4 22.33
CDY37963 Canola cytosol 20.93 21.78
CDX68882 Canola plastid 20.4 21.76
CDX93398 Canola cytosol 20.67 21.68
CDY51639 Canola nucleus 20.13 21.51
CDX69059 Canola endoplasmic reticulum, plasma membrane 20.4 21.43
CDY61983 Canola cytosol, plastid 19.87 21.38
CDY20615 Canola cytosol 20.27 20.91
CDY20960 Canola cytosol 20.27 20.88
CDY11592 Canola plastid 20.27 20.68
CDX82325 Canola cytosol, plastid 19.6 20.62
CDY71995 Canola nucleus, plastid 11.73 20.56
CDY47133 Canola cytosol, plastid 20.4 20.35
CDX95997 Canola plastid 19.87 20.3
CDY59546 Canola plastid 11.73 20.18
CDY16146 Canola plastid 21.73 19.47
CDY46900 Canola plasma membrane 17.47 17.73
CDY38610 Canola plastid 20.13 17.14
CDY66134 Canola nucleus 18.93 15.43
CDY51224 Canola plastid 18.8 14.9
CDY48704 Canola cytosol, mitochondrion, plasma membrane, plastid 3.87 7.47
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.32Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078H4W6UniProt:A0A078H4W6
EnsemblPlants:CDY32921ProteinID:CDY32921ProteinID:CDY32921.1InterPro:F-box-like_dom_sfInterPro:F-box_domGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00053115001InterPro:IPR000719InterPro:IPR001810InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfPFAM:PF00646PFAM:PF07714ScanProsite:PS00109PFscan:PS50011
PFscan:PS50181PANTHER:PTHR27001PANTHER:PTHR27001:SF497InterPro:Prot_kinase_domSMART:SM00256SUPFAM:SSF52047
SUPFAM:SSF56112SUPFAM:SSF81383InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Tyr_kinase_ASUniParc:UPI0004EDD39FSEG:seg
Description
BnaC02g12050DBnaC02g12050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4W6]
Coordinates
chrLK032302:-:439601..447153
Molecular Weight (calculated)
85355.0 Da
IEP (calculated)
8.058
GRAVY (calculated)
-0.062
Length
750 amino acids
Sequence
(BLAST)
001: MDRLSQLPDD LLIKILSFVP TKCAVATSIL SKRWLSLWTL VPGLVFEDFS EEENEEINEI HVRSLSQFVS GTLLLHKAAV LERVHLNSAT ECSPWEIGLW
101: VRIAVDRFTL ETLQLRRVIL SEVPCRLSFP SLTKLRLLSV KYSDDGSFSR IVSNCPILDD LVVETCHRDN VATFTVNLPS LQSLSVRNTV RESPPDDHLV
201: VIHSQSLKQL DIVDYFGELK RIGNLPKLEH WILVDRNVRW MQPRHVPECM LLHLKTFDPT YLLHTLLCFH DDLPVVFQVE KVLSFRLWLQ YLAREIKKKK
301: QSIVMDRLSQ LPDDLLIKIL SFVPTKCAVA TSILSKRWLS LWTLVASLVF EDFSEEEDEE INEIHVRSLS QFVSGTLLFT QSSCPRKVSS QQHRKKSFFT
401: SCRMLLVLIT AKISVYSSGH RFGEKELLRI KELESVPKAS TSCQLRNRDA FRYGNIVDAP CYSKLTSTKG FSKGSFLAEG GFGSVHRGTL PGGQIIAVKQ
501: YKIASTQGDK EFCSEVEVLS CAQHRNVVML IGLCVEDGKR LLVYEYICYG SLHSHLYGLG KEPLGWSARQ KIAVGAARGL RYLHEECRVG CIVHRDMRPN
601: NILLTHDFEP LVGDFGLARW QPEGDKGVET RVIGTFGYLA PEYTQSGQIT EKADVYSFGV VLVELITGRK AMDIKRPKGQ QCLTEWARPL LQKQAIKELL
701: DPRLMNCYSE QEVYCMALCA YLCIRRDPNS RPRMSQVLRM LEGDVVMSPI
Best Arabidopsis Sequence Match ( AT1G55200.1 )
(BLAST)
001: MSREKQGKRS GSNGTEKVLV AVKASREISK TAFVWALTHI VHPGDCITLI VVVTSYNAGR KLWTFPRFAG DCATGHWKLH SDPMSEIKSD LTDTCSQMIL
101: QLHDVYDPNK VNVRIKIVSG SPCGAVAAEA KKSQANWVVL DKHLKHEEKR CIDELQCNIV AMKRSEAKVL RLNLVGSSTK EPELASEKNK NRLLDSVKAV
201: VTTTPMSSPE VETSFTGTEA WTSSVSSSDL GTSSPVFTAE VRKDETLVVK ENESDSDSES ENLSLPSLSK RFQPWISEYL STHCVSMQES TRGDDKAVQV
301: STKKALLEKI SKLDEGEEAA MSSKRKDLEE YSGTLRALSR NAPPVSPPLC SICQHKAPVF GKPPRFFSYK ELELATNGFS RANFLAEGGF GSVHRGVLPE
401: GQIVAVKQHK VASTQGDVEF CSEVEVLSCA QHRNVVMLIG FCIEDTRRLL VYEYICNGSL DSHLYGRHKD TLGWPARQKI AVGAARGLRY LHEECRVGCI
501: VHRDMRPNNI LITHDYEPLV GDFGLARWQP DGELGVDTRV IGTFGYLAPE YAQSGQITEK ADVYSFGVVL IELITGRKAM DIYRPKGQQC LTEWARSLLE
601: EYAVEELVDP RLEKRYSETQ VICMIHTASL CIRRDPHLRP RMSQVLRLLE GDMLMNEISG RFNGRLSTEK GLRDHN
Arabidopsis Description
Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9C890]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.