CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035231.1-P	Field mustard	plasma membrane	91.75	42.18
Bra021250.1-P	Field mustard	plasma membrane	91.75	39.12
CDY46900	Canola	plasma membrane	69.59	36.54
CDY48706	Canola	cytosol	46.91	34.47
Bra021253.1-P	Field mustard	plasma membrane	85.57	29.38
CDY71995	Canola	nucleus, plastid	17.01	15.42
CDY59546	Canola	plastid	17.01	15.14
CDY02546	Canola	plastid	15.21	11.5
GSMUA_Achr7P14360_001	Banana	plastid	15.98	11.44
CDY47531	Canola	plastid	14.95	11.22
VIT_09s0002g04210.t01	Wine grape	plastid	15.72	11.07
PGSC0003DMT400006515	Potato	plastid	16.49	10.88
Solyc03g120760.2.1	Tomato	plasma membrane, plastid	16.24	10.84
CDY65603	Canola	plastid	17.27	10.84
GSMUA_Achr5P06880_001	Banana	plastid	11.34	10.63
KRH47030	Soybean	nucleus, plastid	15.46	10.53
CDX75275	Canola	cytosol	9.54	10.51
CDX75434	Canola	nucleus, plastid	18.04	10.42
CDY39543	Canola	plastid	17.27	10.32
CDX77417	Canola	plastid	17.27	10.31
CDX76282	Canola	nucleus, plastid	17.53	10.29
GSMUA_Achr10P...	Banana	plastid	12.89	10.2
GSMUA_Achr8P19800_001	Banana	cytosol	10.82	10.19
HORVU1Hr1G030140.2	Barley	plastid	15.98	10.18
CDY46249	Canola	nucleus, plastid	17.27	10.09
CDX92276	Canola	plasma membrane	12.37	10.0
TraesCS1D01G126300.1	Wheat	plastid	16.75	9.95
CDY48859	Canola	nucleus, plastid	17.53	9.93
CDX69059	Canola	endoplasmic reticulum, plasma membrane	18.04	9.8
TraesCS1A01G127900.1	Wheat	plastid	16.49	9.73
TraesCS3B01G179300.1	Wheat	plastid	15.72	9.67
CDY48084	Canola	nucleus, plastid	17.01	9.62
HORVU3Hr1G030900.1	Barley	plastid	15.46	9.54
Zm00001d039311_P001	Maize	mitochondrion	15.21	9.52
TraesCS3D01G160000.1	Wheat	plastid	15.46	9.49
CDX99312	Canola	nucleus, plastid	15.98	9.47
TraesCS3A01G152200.1	Wheat	plastid	15.21	9.37
Os05t0218400-01	Rice	plasma membrane	16.24	9.33
CDY61983	Canola	cytosol, plastid	16.75	9.33
CDX68882	Canola	plastid	16.75	9.25
Os01t0227200-01	Rice	plasma membrane	14.18	9.21
OQU86081	Sorghum	plastid	14.69	9.19
CDX95494	Canola	nucleus, plastid	16.24	9.18
CDY04245	Canola	plastid	15.98	9.13
Zm00001d010421_P002	Maize	plasma membrane	15.98	9.13
CDY01653	Canola	plastid	15.21	8.98
CDX74517	Canola	plastid	15.21	8.89
CDY07370	Canola	plastid	15.21	8.86
CDX82325	Canola	cytosol, plastid	16.24	8.84
EES19240	Sorghum	cytosol, plasma membrane, plastid	13.14	8.76
CDY18547	Canola	nucleus, plastid	15.46	8.76
CDY41442	Canola	plastid	14.69	8.65
CDY09439	Canola	plastid	15.21	8.64
CDY03749	Canola	plastid	14.69	8.48
CDY59350	Canola	plastid	14.43	8.45
CDY11592	Canola	plastid	15.72	8.3
CDX91719	Canola	plastid	14.18	8.16
KRH47029	Soybean	plastid	11.6	8.15
CDY51639	Canola	nucleus	14.69	8.12
TraesCS1B01G147000.2	Wheat	plastid	12.89	8.1
Zm00001d037811_P001	Maize	plasma membrane	10.31	8.08
GSMUA_Achr10P...	Banana	cytosol	12.37	8.0
CDY47133	Canola	cytosol, plastid	15.46	7.98
CDY44156	Canola	nucleus	14.43	7.87
CDY37963	Canola	cytosol	14.18	7.63
CDX93398	Canola	cytosol	13.92	7.55
CDY16146	Canola	plastid	16.24	7.53
CDY51224	Canola	plastid	18.3	7.51
CDY66134	Canola	nucleus	17.78	7.5
CDX95997	Canola	plastid	14.18	7.49
CDY02454	Canola	cytosol, nucleus, plasma membrane	11.6	7.45
CDX75728	Canola	cytosol	11.34	7.33
CDY10586	Canola	cytosol, nucleus, plasma membrane	11.34	7.28
CDY32884	Canola	plasma membrane	11.6	7.28
CDY20960	Canola	cytosol	13.66	7.28
CDY20615	Canola	cytosol	13.14	7.02
CDX82522	Canola	cytosol	11.6	6.85
CDY32758	Canola	plasma membrane	11.6	6.77
CDY38610	Canola	plastid	14.95	6.58
CDY20711	Canola	cytosol, plasma membrane, plastid	11.08	6.5
CDX97507	Canola	cytosol, mitochondrion, nucleus	11.6	6.02
CDY55134	Canola	cytosol	11.6	5.98
CDY51732	Canola	cytosol	11.6	5.98
CDY23630	Canola	cytosol	11.08	5.8
CDY32921	Canola	plasma membrane	7.47	3.87
CDY32757	Canola	plasma membrane	1.29	0.71
Bra038894.1-P	Field mustard	cytosol	0.0	0.0
Bra021251.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:35.1	GO:A0A078IH27	UniProt:A0A078IH27	EnsemblPlants:CDY48704
ProteinID:CDY48704	ProteinID:CDY48704.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00091591001	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Malectin-like_Carb-bd_dom	PFAM:PF12819	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF44
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI0004EDBC74
SEG:seg	:	:	:	:	:

Description

BnaCnng16810DBnaCnng16810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IH27]

Coordinates

chrLK032787:-:86028..87857

Molecular Weight (calculated)

43120.3 Da

IEP (calculated)

6.923

GRAVY (calculated)

-0.274

Length

388 amino acids

Sequence
(BLAST)

001: MKRTSTKHAL IYCFRYGSGV YGADVFDRIW LPYNSENWSQ IRTDNSVDND NGFKVPENVM ATASVPTDPD AHMNISLTGL HQTSRFYVCL HFSEIQELGP
101: NDTREFKVMY NGRLIIDPFK PISFYTSSFI GDELGPNANG QCTFSLQKTA SSTLPPLLNA MEVYMVNSLS QNETDTKEVD TMINIKLSCG IMSNQRSFHC
201: KNLTTHGLTG EIQESISNLS SLQVLDFSNN SLIGPVQEFL AHMTSLKVII EGNPGICSSA SCATTNKKKT KTKTMVIASV AASIFLILVI FLVILKRRAK
301: LGRYPNSDDD DNNLQQCNNQ SSFSEMANNM FTYEDLAQAT DNFSNVNLIG QGGFGYVHKG VLPDGTEVAI KQLKAGRRQG ERKFRVEI

Best Arabidopsis Sequence Match ( AT1G51800.1 )
(BLAST)

001: MAFSSCFLLV LLQIFSALLL CLAQDQSGFI SLDCGSPRET SFREKTTNIT YISDANFINT GVGGSIKQGY RTQFQQQTWN LRSFPQGIRN CYTLNLTIGD
101: EYLIRANFLH GGYDDKPSTQ FELYLGPNLW STVTTTNETE ASIFEMIHIL TTDRLQICLV KTGNATPFIS ALELRKLMNT TYLTRQGSLQ TFIRADVGAT
201: VNQGYRYGID VFDRVWTPYN FGNWSQISTN QSVNINNDYQ PPEIAMVTAS VPTDPDAAMN ISLVGVERTV QFYVFMHFAE IQELKSNDTR EFNIMYNNKH
301: IYGPFRPLNF TTSSVFTPTE VVADANGQYI FSLQRTGNST LPPLLNAMEI YSVNLLPQQE TDRKEVDAMM NIKSAYGVNK IDWEGDPCVP LDYKWSGVNC
401: TYVDNETPKI ISLDLSTSGL TGEILEFISD LTSLEVLDLS NNSLTGSVPE FLANMETLKL INLSGNELNG SIPATLLDKE RRGSITLSIE GNTGLCSSTS
501: CATTKKKKKN TVIAPVAASL VSVFLIGAGI VTFLILKRKK RTKLGLNPNS GTGTTPLHSR SHHGFEPPVI AKNRKLTYID VVKITNNFER VLGRGGFGVV
601: YYGVLNNEPV AVKMLTESTA LGYKQFKAEV ELLLRVHHKD LTCLVGYCEE GDKMSLIYEF MANGDLKEHL SGKRGPSILT WEGRLRIAAE SAQGLEYLHN
701: GCKPQIVHRD IKTTNILLNE KFQAKLADFG LSRSFPLGTE THVSTIVAGT PGYLDPEYYR TNWLTEKSDV FSFGVVLLEL VTNQPVIDMK REKSHIAEWV
801: GLMLSRGDIN SIVDPKLQGD FDPNTIWKVV ETAMTCLNPS SSRRPTMTQV VMDLKECLNM EMARNMGSRM TDSTNDSSIE LSMNFTTELN PGAR

Arabidopsis Description

IOS1LRR receptor-like serine/threonine-protein kinase IOS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8I6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.